Gene : DIP13 C. reinhardtii v5.6
Primary Identifier:  ? Cre17.g724550 Defline:  (1 of 1) K16780 - sjoegren syndrome nuclear autoantigen 1 (SSNA1)
Genomic Order:  629 Name:  ? Cre17.g724550
Secondary Identifier:  ? PAC:30782360
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g724550 0.5kb upstream 0.5kb upstream 2073 true chromosome_17: 3437781-3439853 Chlamydomonas reinhardtii
Cre17.g724550 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3437781-3438280 Chlamydomonas reinhardtii
Cre17.g724550 0.5kb downstream 0.5kb downstream 2073 true chromosome_17: 3438281-3440353 Chlamydomonas reinhardtii
Cre17.g724550 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3439854-3440353 Chlamydomonas reinhardtii
Cre17.g724550 1.0kb upstream 1.0kb upstream 2573 true chromosome_17: 3437281-3439853 Chlamydomonas reinhardtii
Cre17.g724550 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3437281-3438280 Chlamydomonas reinhardtii
Cre17.g724550 1.0kb downstream 1.0kb downstream 2573 true chromosome_17: 3438281-3440853 Chlamydomonas reinhardtii
Cre17.g724550 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3439854-3440853 Chlamydomonas reinhardtii
Cre17.g724550 2.0kb upstream 2.0kb upstream 3573 true chromosome_17: 3436281-3439853 Chlamydomonas reinhardtii
Cre17.g724550 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3436281-3438280 Chlamydomonas reinhardtii
Cre17.g724550 2.0kb downstream 2.0kb downstream 3573 true chromosome_17: 3438281-3441853 Chlamydomonas reinhardtii
Cre17.g724550 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3439854-3441853 Chlamydomonas reinhardtii
Cre17.g724550 5.0kb upstream 5.0kb upstream 6573 true chromosome_17: 3433281-3439853 Chlamydomonas reinhardtii
Cre17.g724550 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3433281-3438280 Chlamydomonas reinhardtii
Cre17.g724550 5.0kb downstream 5.0kb downstream 6573 true chromosome_17: 3438281-3444853 Chlamydomonas reinhardtii
Cre17.g724550 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3439854-3444853 Chlamydomonas reinhardtii
Cre17.g724550 10.0kb upstream 10.0kb upstream 11573 true chromosome_17: 3428281-3439853 Chlamydomonas reinhardtii
Cre17.g724550 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3428281-3438280 Chlamydomonas reinhardtii
Cre17.g724550 10.0kb downstream 10.0kb downstream 11573 true chromosome_17: 3438281-3449853 Chlamydomonas reinhardtii
Cre17.g724550 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3439854-3449853 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108753 5260 Chlorophyte View MSA
123427012 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.046     High Low
cufflinks 72.972     High  
cufflinks 112.836     High High
cufflinks 115.553     High High
cufflinks 47.162     High  
cufflinks 52.704     High  
cufflinks 66.446     High  
cufflinks 70.89     High  
cufflinks 12.348     High Low
cufflinks 79.169     High  
cufflinks 111.054     High High
cufflinks 62.698     High  
cufflinks 48.656     High  
cufflinks 60.173     High  
cufflinks 94.714     High  
cufflinks 17.771     High Low
cufflinks 18.721     High Low
cufflinks 71.332     High  
cufflinks 116.398     High High
cufflinks 79.891     High  
cufflinks 61.668     High  
cufflinks 14.362     High Low
cufflinks 121.354     High High
cufflinks 55.607     High  
cufflinks 9.92       Low
cufflinks 21.1271 2.28611 39.9681 High  
cufflinks 18.0424 4.87697 31.2079   Low
cufflinks 26.3624 0.0 53.1143    
cufflinks 21.8132 2.1962 41.4302    
cufflinks 41.9291 6.69745 77.1607 High High

0 Strain