Gene : Cre17.g725650 C. reinhardtii v5.6
Defline:  (1 of 2) K03453 - bile acid:Na+ symporter, BASS family (TC.BASS) Genomic Order:  653
Name:  ? Cre17.g725650 Secondary Identifier:  ? PAC:30782628
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g725650 0.5kb upstream 0.5kb upstream 4238 true chromosome_17: 3577843-3582080 Chlamydomonas reinhardtii
Cre17.g725650 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3581581-3582080 Chlamydomonas reinhardtii
Cre17.g725650 0.5kb downstream 0.5kb downstream 4238 true chromosome_17: 3577343-3581580 Chlamydomonas reinhardtii
Cre17.g725650 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3577343-3577842 Chlamydomonas reinhardtii
Cre17.g725650 1.0kb upstream 1.0kb upstream 4738 true chromosome_17: 3577843-3582580 Chlamydomonas reinhardtii
Cre17.g725650 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3581581-3582580 Chlamydomonas reinhardtii
Cre17.g725650 1.0kb downstream 1.0kb downstream 4738 true chromosome_17: 3576843-3581580 Chlamydomonas reinhardtii
Cre17.g725650 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3576843-3577842 Chlamydomonas reinhardtii
Cre17.g725650 2.0kb upstream 2.0kb upstream 5738 true chromosome_17: 3577843-3583580 Chlamydomonas reinhardtii
Cre17.g725650 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3581581-3583580 Chlamydomonas reinhardtii
Cre17.g725650 2.0kb downstream 2.0kb downstream 5738 true chromosome_17: 3575843-3581580 Chlamydomonas reinhardtii
Cre17.g725650 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3575843-3577842 Chlamydomonas reinhardtii
Cre17.g725650 5.0kb upstream 5.0kb upstream 8738 true chromosome_17: 3577843-3586580 Chlamydomonas reinhardtii
Cre17.g725650 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3581581-3586580 Chlamydomonas reinhardtii
Cre17.g725650 5.0kb downstream 5.0kb downstream 8738 true chromosome_17: 3572843-3581580 Chlamydomonas reinhardtii
Cre17.g725650 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3572843-3577842 Chlamydomonas reinhardtii
Cre17.g725650 10.0kb upstream 10.0kb upstream 13738 true chromosome_17: 3577843-3591580 Chlamydomonas reinhardtii
Cre17.g725650 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3581581-3591580 Chlamydomonas reinhardtii
Cre17.g725650 10.0kb downstream 10.0kb downstream 13738 true chromosome_17: 3567843-3581580 Chlamydomonas reinhardtii
Cre17.g725650 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3567843-3577842 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112690 5260 Chlorophyte View MSA
123427873 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.607        
cufflinks 3.412        
cufflinks 4.006        
cufflinks 2.386        
cufflinks 2.575        
cufflinks 3.012        
cufflinks 2.724        
cufflinks 1.843        
cufflinks 3.563        
cufflinks 6.19       High
cufflinks 1.63       Low
cufflinks 2.167        
cufflinks 2.606        
cufflinks 2.183        
cufflinks 3.273        
cufflinks 2.407        
cufflinks 4.024       High
cufflinks 2.968        
cufflinks 0.853       Low
cufflinks 1.343       Low
cufflinks 2.419        
cufflinks 4.025       High
cufflinks 1.421       Low
cufflinks 2.773        
cufflinks 3.666        
cufflinks 4.89931 0.536887 9.26174    
cufflinks 16.4035 4.00602 28.8009    
cufflinks 5.15194 0.0 11.5052    
cufflinks 6.76071 0.979973 12.5415    
cufflinks 11.1007 2.10627 20.0952    

0 Strain