Gene : Cre17.g724700 C. reinhardtii v5.6
Defline:  (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) Genomic Order:  632
Name:  ? Cre17.g724700 Secondary Identifier:  ? PAC:30782195
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6927 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g724700 0.5kb upstream 0.5kb upstream 4924 true chromosome_17: 3448178-3453101 Chlamydomonas reinhardtii
Cre17.g724700 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 3452602-3453101 Chlamydomonas reinhardtii
Cre17.g724700 0.5kb downstream 0.5kb downstream 4924 true chromosome_17: 3447678-3452601 Chlamydomonas reinhardtii
Cre17.g724700 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 3447678-3448177 Chlamydomonas reinhardtii
Cre17.g724700 1.0kb upstream 1.0kb upstream 5424 true chromosome_17: 3448178-3453601 Chlamydomonas reinhardtii
Cre17.g724700 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 3452602-3453601 Chlamydomonas reinhardtii
Cre17.g724700 1.0kb downstream 1.0kb downstream 5424 true chromosome_17: 3447178-3452601 Chlamydomonas reinhardtii
Cre17.g724700 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 3447178-3448177 Chlamydomonas reinhardtii
Cre17.g724700 2.0kb upstream 2.0kb upstream 6424 true chromosome_17: 3448178-3454601 Chlamydomonas reinhardtii
Cre17.g724700 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 3452602-3454601 Chlamydomonas reinhardtii
Cre17.g724700 2.0kb downstream 2.0kb downstream 6424 true chromosome_17: 3446178-3452601 Chlamydomonas reinhardtii
Cre17.g724700 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 3446178-3448177 Chlamydomonas reinhardtii
Cre17.g724700 5.0kb upstream 5.0kb upstream 9424 true chromosome_17: 3448178-3457601 Chlamydomonas reinhardtii
Cre17.g724700 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 3452602-3457601 Chlamydomonas reinhardtii
Cre17.g724700 5.0kb downstream 5.0kb downstream 9424 true chromosome_17: 3443178-3452601 Chlamydomonas reinhardtii
Cre17.g724700 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 3443178-3448177 Chlamydomonas reinhardtii
Cre17.g724700 10.0kb upstream 10.0kb upstream 14424 true chromosome_17: 3448178-3462601 Chlamydomonas reinhardtii
Cre17.g724700 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 3452602-3462601 Chlamydomonas reinhardtii
Cre17.g724700 10.0kb downstream 10.0kb downstream 14424 true chromosome_17: 3438178-3452601 Chlamydomonas reinhardtii
Cre17.g724700 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 3438178-3448177 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113463 5260 Chlorophyte View MSA
123429167 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.582        
cufflinks 1.265        
cufflinks 1.946        
cufflinks 2.688        
cufflinks 1.689        
cufflinks 2.224        
cufflinks 2.028        
cufflinks 3.422       High
cufflinks 2.044        
cufflinks 1.201        
cufflinks 2.178        
cufflinks 3.063        
cufflinks 3.583       High
cufflinks 1.625        
cufflinks 2.517        
cufflinks 0.669       Low
cufflinks 2.33        
cufflinks 2.079        
cufflinks 0.947       Low
cufflinks 0.604       Low
cufflinks 2.726        
cufflinks 2.014        
cufflinks 0.52       Low
cufflinks 3.632       High
cufflinks 3.006        
cufflinks 4.29189 0.675768 7.90801   High
cufflinks 7.45283 1.59344 13.3122    
cufflinks 1.63497 0.0 3.86744   Low
cufflinks 4.33885 0.687732 7.98997   High
cufflinks 7.36986 1.43244 13.3073    

0 Strain