Gene : Cre17.g731300 C. reinhardtii v5.6
Defline:  (1 of 4) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  772
Name:  ? Cre17.g731300 Secondary Identifier:  ? PAC:30782456
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre17.g731300 0.5kb upstream 0.5kb upstream 3702 true chromosome_17: 4352391-4356092 Chlamydomonas reinhardtii
Cre17.g731300 0.5kb upstream 0.5kb upstream 500 false chromosome_17: 4352391-4352890 Chlamydomonas reinhardtii
Cre17.g731300 0.5kb downstream 0.5kb downstream 3702 true chromosome_17: 4352891-4356592 Chlamydomonas reinhardtii
Cre17.g731300 0.5kb downstream 0.5kb downstream 500 false chromosome_17: 4356093-4356592 Chlamydomonas reinhardtii
Cre17.g731300 1.0kb upstream 1.0kb upstream 4202 true chromosome_17: 4351891-4356092 Chlamydomonas reinhardtii
Cre17.g731300 1.0kb upstream 1.0kb upstream 1000 false chromosome_17: 4351891-4352890 Chlamydomonas reinhardtii
Cre17.g731300 1.0kb downstream 1.0kb downstream 4202 true chromosome_17: 4352891-4357092 Chlamydomonas reinhardtii
Cre17.g731300 1.0kb downstream 1.0kb downstream 1000 false chromosome_17: 4356093-4357092 Chlamydomonas reinhardtii
Cre17.g731300 2.0kb upstream 2.0kb upstream 5202 true chromosome_17: 4350891-4356092 Chlamydomonas reinhardtii
Cre17.g731300 2.0kb upstream 2.0kb upstream 2000 false chromosome_17: 4350891-4352890 Chlamydomonas reinhardtii
Cre17.g731300 2.0kb downstream 2.0kb downstream 5202 true chromosome_17: 4352891-4358092 Chlamydomonas reinhardtii
Cre17.g731300 2.0kb downstream 2.0kb downstream 2000 false chromosome_17: 4356093-4358092 Chlamydomonas reinhardtii
Cre17.g731300 5.0kb upstream 5.0kb upstream 8202 true chromosome_17: 4347891-4356092 Chlamydomonas reinhardtii
Cre17.g731300 5.0kb upstream 5.0kb upstream 5000 false chromosome_17: 4347891-4352890 Chlamydomonas reinhardtii
Cre17.g731300 5.0kb downstream 5.0kb downstream 8202 true chromosome_17: 4352891-4361092 Chlamydomonas reinhardtii
Cre17.g731300 5.0kb downstream 5.0kb downstream 5000 false chromosome_17: 4356093-4361092 Chlamydomonas reinhardtii
Cre17.g731300 10.0kb upstream 10.0kb upstream 13202 true chromosome_17: 4342891-4356092 Chlamydomonas reinhardtii
Cre17.g731300 10.0kb upstream 10.0kb upstream 10000 false chromosome_17: 4342891-4352890 Chlamydomonas reinhardtii
Cre17.g731300 10.0kb downstream 10.0kb downstream 13202 true chromosome_17: 4352891-4366092 Chlamydomonas reinhardtii
Cre17.g731300 10.0kb downstream 10.0kb downstream 10000 false chromosome_17: 4356093-4366092 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108475 5260 Chlorophyte View MSA
123428725 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.228     High  
cufflinks 16.851     High  
cufflinks 20.766     High High
cufflinks 12.885        
cufflinks 14.432        
cufflinks 19.663     High High
cufflinks 19.319     High High
cufflinks 17.467     High  
cufflinks 17.229     High  
cufflinks 5.84       Low
cufflinks 9.628        
cufflinks 13.502        
cufflinks 12.011     High  
cufflinks 15.122     High  
cufflinks 12.051        
cufflinks 14.213     High  
cufflinks 12.17     High  
cufflinks 12.957        
cufflinks 3.696       Low
cufflinks 7.104       Low
cufflinks 12.989     High  
cufflinks 14.714     High  
cufflinks 12.735        
cufflinks 15.047        
cufflinks 16.74     High  
cufflinks 38.6491 0.0 77.3834 High Low
cufflinks 25.0751 6.60336 43.5468    
cufflinks 39.7183 0.0 81.3605 High High
cufflinks 18.1049 1.37957 34.8303   Low
cufflinks 26.3908 4.29885 48.4829    

0 Strain