Gene : DEG1A C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g088400 Defline:  (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC
Genomic Order:  348 Name:  ? Cre02.g088400
Secondary Identifier:  ? PAC:30785518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g088400 0.5kb upstream 0.5kb upstream 5232 true chromosome_2: 1996394-2001625 Chlamydomonas reinhardtii
Cre02.g088400 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 1996394-1996893 Chlamydomonas reinhardtii
Cre02.g088400 0.5kb downstream 0.5kb downstream 5232 true chromosome_2: 1996894-2002125 Chlamydomonas reinhardtii
Cre02.g088400 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 2001626-2002125 Chlamydomonas reinhardtii
Cre02.g088400 1.0kb upstream 1.0kb upstream 5732 true chromosome_2: 1995894-2001625 Chlamydomonas reinhardtii
Cre02.g088400 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 1995894-1996893 Chlamydomonas reinhardtii
Cre02.g088400 1.0kb downstream 1.0kb downstream 5732 true chromosome_2: 1996894-2002625 Chlamydomonas reinhardtii
Cre02.g088400 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 2001626-2002625 Chlamydomonas reinhardtii
Cre02.g088400 2.0kb upstream 2.0kb upstream 6732 true chromosome_2: 1994894-2001625 Chlamydomonas reinhardtii
Cre02.g088400 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 1994894-1996893 Chlamydomonas reinhardtii
Cre02.g088400 2.0kb downstream 2.0kb downstream 6732 true chromosome_2: 1996894-2003625 Chlamydomonas reinhardtii
Cre02.g088400 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 2001626-2003625 Chlamydomonas reinhardtii
Cre02.g088400 5.0kb upstream 5.0kb upstream 9732 true chromosome_2: 1991894-2001625 Chlamydomonas reinhardtii
Cre02.g088400 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 1991894-1996893 Chlamydomonas reinhardtii
Cre02.g088400 5.0kb downstream 5.0kb downstream 9732 true chromosome_2: 1996894-2006625 Chlamydomonas reinhardtii
Cre02.g088400 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 2001626-2006625 Chlamydomonas reinhardtii
Cre02.g088400 10.0kb upstream 10.0kb upstream 14732 true chromosome_2: 1986894-2001625 Chlamydomonas reinhardtii
Cre02.g088400 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 1986894-1996893 Chlamydomonas reinhardtii
Cre02.g088400 10.0kb downstream 10.0kb downstream 14732 true chromosome_2: 1996894-2011625 Chlamydomonas reinhardtii
Cre02.g088400 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 2001626-2011625 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111132 5260 Chlorophyte View MSA
123427247 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.75       Low
cufflinks 1.635        
cufflinks 3.053        
cufflinks 1.87        
cufflinks 1.565        
cufflinks 2.605        
cufflinks 1.704        
cufflinks 3.121        
cufflinks 0.729       Low
cufflinks 4.874       High
cufflinks 1.008       Low
cufflinks 3.138        
cufflinks 4.974       High
cufflinks 3.296        
cufflinks 1.405        
cufflinks 1.637        
cufflinks 4.248       High
cufflinks 4.693       High
cufflinks 0.602       Low
cufflinks 4.848       High
cufflinks 1.584        
cufflinks 2.155        
cufflinks 4.073        
cufflinks 3.367        
cufflinks 3.147        
cufflinks 20.7947 0.0 43.3084    
cufflinks 6.38671 0.884827 11.8886    
cufflinks 16.0475 0.0 32.3017    
cufflinks 5.42916 0.920564 9.93777    
cufflinks 7.93354 1.58799 14.2791    

0 Strain