Gene : Cre02.g091200 C. reinhardtii v5.6
Defline:  (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  408
Name:  ? Cre02.g091200 Secondary Identifier:  ? PAC:30785175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g091200 0.5kb upstream 0.5kb upstream 6370 true chromosome_2: 2392465-2398834 Chlamydomonas reinhardtii
Cre02.g091200 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 2392465-2392964 Chlamydomonas reinhardtii
Cre02.g091200 0.5kb downstream 0.5kb downstream 6370 true chromosome_2: 2392965-2399334 Chlamydomonas reinhardtii
Cre02.g091200 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 2398835-2399334 Chlamydomonas reinhardtii
Cre02.g091200 1.0kb upstream 1.0kb upstream 6870 true chromosome_2: 2391965-2398834 Chlamydomonas reinhardtii
Cre02.g091200 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 2391965-2392964 Chlamydomonas reinhardtii
Cre02.g091200 1.0kb downstream 1.0kb downstream 6870 true chromosome_2: 2392965-2399834 Chlamydomonas reinhardtii
Cre02.g091200 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 2398835-2399834 Chlamydomonas reinhardtii
Cre02.g091200 2.0kb upstream 2.0kb upstream 7870 true chromosome_2: 2390965-2398834 Chlamydomonas reinhardtii
Cre02.g091200 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 2390965-2392964 Chlamydomonas reinhardtii
Cre02.g091200 2.0kb downstream 2.0kb downstream 7870 true chromosome_2: 2392965-2400834 Chlamydomonas reinhardtii
Cre02.g091200 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 2398835-2400834 Chlamydomonas reinhardtii
Cre02.g091200 5.0kb upstream 5.0kb upstream 10870 true chromosome_2: 2387965-2398834 Chlamydomonas reinhardtii
Cre02.g091200 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 2387965-2392964 Chlamydomonas reinhardtii
Cre02.g091200 5.0kb downstream 5.0kb downstream 10870 true chromosome_2: 2392965-2403834 Chlamydomonas reinhardtii
Cre02.g091200 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 2398835-2403834 Chlamydomonas reinhardtii
Cre02.g091200 10.0kb upstream 10.0kb upstream 15870 true chromosome_2: 2382965-2398834 Chlamydomonas reinhardtii
Cre02.g091200 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 2382965-2392964 Chlamydomonas reinhardtii
Cre02.g091200 10.0kb downstream 10.0kb downstream 15870 true chromosome_2: 2392965-2408834 Chlamydomonas reinhardtii
Cre02.g091200 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 2398835-2408834 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108376 5260 Chlorophyte View MSA
123424235 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.567        
cufflinks 1.04       Low
cufflinks 3.889        
cufflinks 5.252        
cufflinks 0.986       Low
cufflinks 0.995       Low
cufflinks 1.613        
cufflinks 4.064        
cufflinks 1.409        
cufflinks 0.739       Low
cufflinks 5.733       High
cufflinks 3.523        
cufflinks 1.675        
cufflinks 1.451        
cufflinks 2.136        
cufflinks 1.209        
cufflinks 9.332       High
cufflinks 3.152        
cufflinks 0.941       Low
cufflinks 9.706       High
cufflinks 2.108        
cufflinks 7.706       High
cufflinks 2.425        
cufflinks 5.681       High
cufflinks 6.912       High
cufflinks 1.1683 0.00408167 2.33252   High
cufflinks 4.99649 0.929786 9.06319    
cufflinks 12.5212 0.0 25.1644    
cufflinks 5.21031 0.884427 9.53619   High
cufflinks 3.17723 0.376776 5.97769   Low

0 Strain