Gene : TRS23 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g077500 Defline:  (1 of 1) PTHR23249:SF15 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 4
Genomic Order:  102 Name:  ? Cre02.g077500
Secondary Identifier:  ? PAC:30784854
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g077500 0.5kb upstream 0.5kb upstream 3019 true chromosome_2: 554720-557738 Chlamydomonas reinhardtii
Cre02.g077500 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 554720-555219 Chlamydomonas reinhardtii
Cre02.g077500 0.5kb downstream 0.5kb downstream 3019 true chromosome_2: 555220-558238 Chlamydomonas reinhardtii
Cre02.g077500 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 557739-558238 Chlamydomonas reinhardtii
Cre02.g077500 1.0kb upstream 1.0kb upstream 3519 true chromosome_2: 554220-557738 Chlamydomonas reinhardtii
Cre02.g077500 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 554220-555219 Chlamydomonas reinhardtii
Cre02.g077500 1.0kb downstream 1.0kb downstream 3519 true chromosome_2: 555220-558738 Chlamydomonas reinhardtii
Cre02.g077500 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 557739-558738 Chlamydomonas reinhardtii
Cre02.g077500 2.0kb upstream 2.0kb upstream 4519 true chromosome_2: 553220-557738 Chlamydomonas reinhardtii
Cre02.g077500 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 553220-555219 Chlamydomonas reinhardtii
Cre02.g077500 2.0kb downstream 2.0kb downstream 4519 true chromosome_2: 555220-559738 Chlamydomonas reinhardtii
Cre02.g077500 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 557739-559738 Chlamydomonas reinhardtii
Cre02.g077500 5.0kb upstream 5.0kb upstream 7519 true chromosome_2: 550220-557738 Chlamydomonas reinhardtii
Cre02.g077500 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 550220-555219 Chlamydomonas reinhardtii
Cre02.g077500 5.0kb downstream 5.0kb downstream 7519 true chromosome_2: 555220-562738 Chlamydomonas reinhardtii
Cre02.g077500 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 557739-562738 Chlamydomonas reinhardtii
Cre02.g077500 10.0kb upstream 10.0kb upstream 12519 true chromosome_2: 545220-557738 Chlamydomonas reinhardtii
Cre02.g077500 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 545220-555219 Chlamydomonas reinhardtii
Cre02.g077500 10.0kb downstream 10.0kb downstream 12519 true chromosome_2: 555220-567738 Chlamydomonas reinhardtii
Cre02.g077500 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 557739-567738 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108452 5260 Chlorophyte View MSA
123424121 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.289       Low
cufflinks 11.095        
cufflinks 13.064        
cufflinks 14.738       High
cufflinks 10.557        
cufflinks 11.945        
cufflinks 13.257        
cufflinks 17.139     High High
cufflinks 7.817       Low
cufflinks 7.892     High Low
cufflinks 10.984        
cufflinks 11.825        
cufflinks 19.885     High High
cufflinks 9.693        
cufflinks 12.737        
cufflinks 7.052       Low
cufflinks 7.834       Low
cufflinks 10.28        
cufflinks 6.269     High Low
cufflinks 8.893        
cufflinks 10.901        
cufflinks 10.181        
cufflinks 15.098     High High
cufflinks 14.496       High
cufflinks 10.126        
cufflinks 4.21044 0.502774 7.91811   Low
cufflinks 5.31154 0.607314 10.0158    
cufflinks 10.765 0.0 21.7988    
cufflinks 7.58814 1.28722 13.8891   High
cufflinks 9.26934 1.68299 16.8557    

0 Strain