Gene : HDH1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g077350 Defline:  (1 of 1) 1.1.1.23 - Histidinol dehydrogenase
Genomic Order:  99 Name:  ? Cre02.g077350
Secondary Identifier:  ? PAC:30786207
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii HISTSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g077350 0.5kb upstream 0.5kb upstream 5698 true chromosome_2: 540032-545729 Chlamydomonas reinhardtii
Cre02.g077350 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 545230-545729 Chlamydomonas reinhardtii
Cre02.g077350 0.5kb downstream 0.5kb downstream 5698 true chromosome_2: 539532-545229 Chlamydomonas reinhardtii
Cre02.g077350 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 539532-540031 Chlamydomonas reinhardtii
Cre02.g077350 1.0kb upstream 1.0kb upstream 6198 true chromosome_2: 540032-546229 Chlamydomonas reinhardtii
Cre02.g077350 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 545230-546229 Chlamydomonas reinhardtii
Cre02.g077350 1.0kb downstream 1.0kb downstream 6198 true chromosome_2: 539032-545229 Chlamydomonas reinhardtii
Cre02.g077350 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 539032-540031 Chlamydomonas reinhardtii
Cre02.g077350 2.0kb upstream 2.0kb upstream 7198 true chromosome_2: 540032-547229 Chlamydomonas reinhardtii
Cre02.g077350 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 545230-547229 Chlamydomonas reinhardtii
Cre02.g077350 2.0kb downstream 2.0kb downstream 7198 true chromosome_2: 538032-545229 Chlamydomonas reinhardtii
Cre02.g077350 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 538032-540031 Chlamydomonas reinhardtii
Cre02.g077350 5.0kb upstream 5.0kb upstream 10198 true chromosome_2: 540032-550229 Chlamydomonas reinhardtii
Cre02.g077350 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 545230-550229 Chlamydomonas reinhardtii
Cre02.g077350 5.0kb downstream 5.0kb downstream 10198 true chromosome_2: 535032-545229 Chlamydomonas reinhardtii
Cre02.g077350 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 535032-540031 Chlamydomonas reinhardtii
Cre02.g077350 10.0kb upstream 10.0kb upstream 15198 true chromosome_2: 540032-555229 Chlamydomonas reinhardtii
Cre02.g077350 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 545230-555229 Chlamydomonas reinhardtii
Cre02.g077350 10.0kb downstream 10.0kb downstream 15198 true chromosome_2: 530032-545229 Chlamydomonas reinhardtii
Cre02.g077350 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 530032-540031 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109586 5260 Chlorophyte View MSA
123424167 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.005     High High
cufflinks 12.653        
cufflinks 12.866        
cufflinks 12.546        
cufflinks 14.784     High  
cufflinks 12.305        
cufflinks 6.277       Low
cufflinks 11.797        
cufflinks 19.944     High High
cufflinks 5.092       Low
cufflinks 12.489        
cufflinks 11.302        
cufflinks 10.111        
cufflinks 13.435     High  
cufflinks 9.661        
cufflinks 20.852     High High
cufflinks 13.075     High  
cufflinks 16.96     High  
cufflinks 2.413       Low
cufflinks 8.748        
cufflinks 10.065        
cufflinks 13.428     High  
cufflinks 7.495        
cufflinks 13.077        
cufflinks 12.712     High  
cufflinks 154.916 0.0 317.558 High Low
cufflinks 74.4174 15.9223 132.913 High High
cufflinks 15.7297 0.0 31.6104   Low
cufflinks 24.8607 1.49365 48.2278 High Low
cufflinks 37.9126 5.07993 70.7452 High  

0 Strain