Gene : Cre02.g082852 C. reinhardtii v5.6
Defline:  (1 of 2) PF06596 - Photosystem II reaction centre X protein (PsbX) (PsbX) Genomic Order:  225
Name:  ? Cre02.g082852 Secondary Identifier:  ? PAC:30786278
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g082852 0.5kb upstream 0.5kb upstream 6772 true chromosome_2: 1327817-1334588 Chlamydomonas reinhardtii
Cre02.g082852 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 1327817-1328316 Chlamydomonas reinhardtii
Cre02.g082852 0.5kb downstream 0.5kb downstream 6772 true chromosome_2: 1328317-1335088 Chlamydomonas reinhardtii
Cre02.g082852 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 1334589-1335088 Chlamydomonas reinhardtii
Cre02.g082852 1.0kb upstream 1.0kb upstream 7272 true chromosome_2: 1327317-1334588 Chlamydomonas reinhardtii
Cre02.g082852 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 1327317-1328316 Chlamydomonas reinhardtii
Cre02.g082852 1.0kb downstream 1.0kb downstream 7272 true chromosome_2: 1328317-1335588 Chlamydomonas reinhardtii
Cre02.g082852 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 1334589-1335588 Chlamydomonas reinhardtii
Cre02.g082852 2.0kb upstream 2.0kb upstream 8272 true chromosome_2: 1326317-1334588 Chlamydomonas reinhardtii
Cre02.g082852 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 1326317-1328316 Chlamydomonas reinhardtii
Cre02.g082852 2.0kb downstream 2.0kb downstream 8272 true chromosome_2: 1328317-1336588 Chlamydomonas reinhardtii
Cre02.g082852 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 1334589-1336588 Chlamydomonas reinhardtii
Cre02.g082852 5.0kb upstream 5.0kb upstream 11272 true chromosome_2: 1323317-1334588 Chlamydomonas reinhardtii
Cre02.g082852 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 1323317-1328316 Chlamydomonas reinhardtii
Cre02.g082852 5.0kb downstream 5.0kb downstream 11272 true chromosome_2: 1328317-1339588 Chlamydomonas reinhardtii
Cre02.g082852 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 1334589-1339588 Chlamydomonas reinhardtii
Cre02.g082852 10.0kb upstream 10.0kb upstream 16272 true chromosome_2: 1318317-1334588 Chlamydomonas reinhardtii
Cre02.g082852 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 1318317-1328316 Chlamydomonas reinhardtii
Cre02.g082852 10.0kb downstream 10.0kb downstream 16272 true chromosome_2: 1328317-1344588 Chlamydomonas reinhardtii
Cre02.g082852 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 1334589-1344588 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113485 5260 Chlorophyte View MSA
123428099 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046     Low  
cufflinks 0.013     Low  
cufflinks 0.032     Low  
cufflinks 0.012     Low  
cufflinks 0.041     Low  
cufflinks 0.045     Low  
cufflinks 0.003     Low Low
cufflinks 0.009     Low  
cufflinks 0.037     Low  
cufflinks 0.049     Low  
cufflinks 0.005     Low Low
cufflinks 0.034     Low  
cufflinks 0.088     Low High
cufflinks 0.027     Low  
cufflinks 0.039     Low  
cufflinks 0.052     Low  
cufflinks 0.077     Low High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.05     Low  
cufflinks 0.04     Low  
cufflinks 0.015     Low  
cufflinks 0.005     Low Low
cufflinks 0.027     Low  
cufflinks 92.9874 0.0 190.816 High High
cufflinks 154.848 21.8674 287.829 High  
cufflinks 28.517 0.0 58.2968 High  
cufflinks 72.4474 0.0 148.464 High  
cufflinks 265.995 1.87345 530.116 High  

0 Strain