Gene : Cre02.g082877 C. reinhardtii v5.6
Defline:  (1 of 2) K01875 - seryl-tRNA synthetase (SARS, serS) Genomic Order:  226
Name:  ? Cre02.g082877 Secondary Identifier:  ? PAC:30784992
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6281 Chlamydomonas reinhardtii pathologic  
Creinhardtii TRNA-CHARGING-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g082877 0.5kb upstream 0.5kb upstream 8426 true chromosome_2: 1334591-1343016 Chlamydomonas reinhardtii
Cre02.g082877 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 1342517-1343016 Chlamydomonas reinhardtii
Cre02.g082877 0.5kb downstream 0.5kb downstream 8426 true chromosome_2: 1334091-1342516 Chlamydomonas reinhardtii
Cre02.g082877 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 1334091-1334590 Chlamydomonas reinhardtii
Cre02.g082877 1.0kb upstream 1.0kb upstream 8926 true chromosome_2: 1334591-1343516 Chlamydomonas reinhardtii
Cre02.g082877 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 1342517-1343516 Chlamydomonas reinhardtii
Cre02.g082877 1.0kb downstream 1.0kb downstream 8926 true chromosome_2: 1333591-1342516 Chlamydomonas reinhardtii
Cre02.g082877 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 1333591-1334590 Chlamydomonas reinhardtii
Cre02.g082877 2.0kb upstream 2.0kb upstream 9926 true chromosome_2: 1334591-1344516 Chlamydomonas reinhardtii
Cre02.g082877 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 1342517-1344516 Chlamydomonas reinhardtii
Cre02.g082877 2.0kb downstream 2.0kb downstream 9926 true chromosome_2: 1332591-1342516 Chlamydomonas reinhardtii
Cre02.g082877 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 1332591-1334590 Chlamydomonas reinhardtii
Cre02.g082877 5.0kb upstream 5.0kb upstream 12926 true chromosome_2: 1334591-1347516 Chlamydomonas reinhardtii
Cre02.g082877 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 1342517-1347516 Chlamydomonas reinhardtii
Cre02.g082877 5.0kb downstream 5.0kb downstream 12926 true chromosome_2: 1329591-1342516 Chlamydomonas reinhardtii
Cre02.g082877 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 1329591-1334590 Chlamydomonas reinhardtii
Cre02.g082877 10.0kb upstream 10.0kb upstream 17926 true chromosome_2: 1334591-1352516 Chlamydomonas reinhardtii
Cre02.g082877 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 1342517-1352516 Chlamydomonas reinhardtii
Cre02.g082877 10.0kb downstream 10.0kb downstream 17926 true chromosome_2: 1324591-1342516 Chlamydomonas reinhardtii
Cre02.g082877 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 1324591-1334590 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111071 5260 Chlorophyte View MSA
123424928 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.25        
cufflinks 0.943        
cufflinks 0.375        
cufflinks 0.657        
cufflinks 1.065        
cufflinks 0.735        
cufflinks 0.35        
cufflinks 0.665        
cufflinks 1.979       High
cufflinks 0.125       Low
cufflinks 0.86        
cufflinks 0.874        
cufflinks 0.164       Low
cufflinks 0.839        
cufflinks 0.653        
cufflinks 1.581        
cufflinks 2.374       High
cufflinks 0.589        
cufflinks 0.057     Low Low
cufflinks 0.45        
cufflinks 0.816        
cufflinks 1.895       High
cufflinks 0.335        
cufflinks 1.033        
cufflinks 2.288       High
cufflinks 8.16841 0.951138 15.3857    
cufflinks 3.15387 0.471462 5.83627    
cufflinks 1.18669 0.0 2.775    
cufflinks 3.07417 0.506301 5.64204   Low
cufflinks 3.85916 0.628361 7.08996    

0 Strain