Gene : Cre02.g081800 C. reinhardtii v5.6
Defline:  (1 of 25) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  202
Name:  ? Cre02.g081800 Secondary Identifier:  ? PAC:30785815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g081800 0.5kb upstream 0.5kb upstream 14036 true chromosome_2: 1162731-1176766 Chlamydomonas reinhardtii
Cre02.g081800 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 1176267-1176766 Chlamydomonas reinhardtii
Cre02.g081800 0.5kb downstream 0.5kb downstream 14036 true chromosome_2: 1162231-1176266 Chlamydomonas reinhardtii
Cre02.g081800 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 1162231-1162730 Chlamydomonas reinhardtii
Cre02.g081800 1.0kb upstream 1.0kb upstream 14536 true chromosome_2: 1162731-1177266 Chlamydomonas reinhardtii
Cre02.g081800 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 1176267-1177266 Chlamydomonas reinhardtii
Cre02.g081800 1.0kb downstream 1.0kb downstream 14536 true chromosome_2: 1161731-1176266 Chlamydomonas reinhardtii
Cre02.g081800 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 1161731-1162730 Chlamydomonas reinhardtii
Cre02.g081800 2.0kb upstream 2.0kb upstream 15536 true chromosome_2: 1162731-1178266 Chlamydomonas reinhardtii
Cre02.g081800 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 1176267-1178266 Chlamydomonas reinhardtii
Cre02.g081800 2.0kb downstream 2.0kb downstream 15536 true chromosome_2: 1160731-1176266 Chlamydomonas reinhardtii
Cre02.g081800 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 1160731-1162730 Chlamydomonas reinhardtii
Cre02.g081800 5.0kb upstream 5.0kb upstream 18536 true chromosome_2: 1162731-1181266 Chlamydomonas reinhardtii
Cre02.g081800 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 1176267-1181266 Chlamydomonas reinhardtii
Cre02.g081800 5.0kb downstream 5.0kb downstream 18536 true chromosome_2: 1157731-1176266 Chlamydomonas reinhardtii
Cre02.g081800 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 1157731-1162730 Chlamydomonas reinhardtii
Cre02.g081800 10.0kb upstream 10.0kb upstream 23536 true chromosome_2: 1162731-1186266 Chlamydomonas reinhardtii
Cre02.g081800 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 1176267-1186266 Chlamydomonas reinhardtii
Cre02.g081800 10.0kb downstream 10.0kb downstream 23536 true chromosome_2: 1152731-1176266 Chlamydomonas reinhardtii
Cre02.g081800 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 1152731-1162730 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124081623 5260 Chlorophyte View MSA
123399344 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.32       Low
cufflinks 0.833        
cufflinks 0.513        
cufflinks 0.666        
cufflinks 0.614        
cufflinks 0.532        
cufflinks 0.854        
cufflinks 0.986        
cufflinks 0.349       Low
cufflinks 0.179       Low
cufflinks 0.76        
cufflinks 1.083       High
cufflinks 0.448        
cufflinks 0.588        
cufflinks 0.937        
cufflinks 0.35       Low
cufflinks 0.886        
cufflinks 0.437        
cufflinks 0.307       Low
cufflinks 1.126       High
cufflinks 0.845        
cufflinks 0.935        
cufflinks 1.045        
cufflinks 1.132       High
cufflinks 0.974        
cufflinks 1.00307 0.120925 1.88522    
cufflinks 2.4622 0.541756 4.38265    
cufflinks 3.71925 0.0 7.49923    
cufflinks 2.91023 0.446093 5.37437    
cufflinks 2.27054 0.427424 4.11366   Low

0 Strain