Gene : HSD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g109550 Defline:  (1 of 2) K12524 - bifunctional aspartokinase / homoserine dehydrogenase 1 (thrA)
Genomic Order:  924 Name:  ? Cre02.g109550
Secondary Identifier:  ? PAC:30785805
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii HOMOSERSYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-3001 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5097 Chlamydomonas reinhardtii pathologic  
Creinhardtii THRESYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g109550 0.5kb upstream 0.5kb upstream 4607 true chromosome_2: 5645622-5650228 Chlamydomonas reinhardtii
Cre02.g109550 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 5649729-5650228 Chlamydomonas reinhardtii
Cre02.g109550 0.5kb downstream 0.5kb downstream 4607 true chromosome_2: 5645122-5649728 Chlamydomonas reinhardtii
Cre02.g109550 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 5645122-5645621 Chlamydomonas reinhardtii
Cre02.g109550 1.0kb upstream 1.0kb upstream 5107 true chromosome_2: 5645622-5650728 Chlamydomonas reinhardtii
Cre02.g109550 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 5649729-5650728 Chlamydomonas reinhardtii
Cre02.g109550 1.0kb downstream 1.0kb downstream 5107 true chromosome_2: 5644622-5649728 Chlamydomonas reinhardtii
Cre02.g109550 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 5644622-5645621 Chlamydomonas reinhardtii
Cre02.g109550 2.0kb upstream 2.0kb upstream 6107 true chromosome_2: 5645622-5651728 Chlamydomonas reinhardtii
Cre02.g109550 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 5649729-5651728 Chlamydomonas reinhardtii
Cre02.g109550 2.0kb downstream 2.0kb downstream 6107 true chromosome_2: 5643622-5649728 Chlamydomonas reinhardtii
Cre02.g109550 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 5643622-5645621 Chlamydomonas reinhardtii
Cre02.g109550 5.0kb upstream 5.0kb upstream 9107 true chromosome_2: 5645622-5654728 Chlamydomonas reinhardtii
Cre02.g109550 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 5649729-5654728 Chlamydomonas reinhardtii
Cre02.g109550 5.0kb downstream 5.0kb downstream 9107 true chromosome_2: 5640622-5649728 Chlamydomonas reinhardtii
Cre02.g109550 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 5640622-5645621 Chlamydomonas reinhardtii
Cre02.g109550 10.0kb upstream 10.0kb upstream 14107 true chromosome_2: 5645622-5659728 Chlamydomonas reinhardtii
Cre02.g109550 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 5649729-5659728 Chlamydomonas reinhardtii
Cre02.g109550 10.0kb downstream 10.0kb downstream 14107 true chromosome_2: 5635622-5649728 Chlamydomonas reinhardtii
Cre02.g109550 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 5635622-5645621 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109682 5260 Chlorophyte View MSA
123424216 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.725     High High
cufflinks 10.739        
cufflinks 5.293        
cufflinks 8.272        
cufflinks 11.398        
cufflinks 9.285        
cufflinks 4.198       Low
cufflinks 8.365        
cufflinks 18.496     High High
cufflinks 3.277       Low
cufflinks 7.149        
cufflinks 9.511        
cufflinks 5.773        
cufflinks 9.254        
cufflinks 8.728        
cufflinks 17.0     High High
cufflinks 13.809     High  
cufflinks 6.907        
cufflinks 1.142       Low
cufflinks 4.075       Low
cufflinks 8.097        
cufflinks 16.552     High High
cufflinks 5.58        
cufflinks 9.926        
cufflinks 15.386     High High
cufflinks 24.4133 1.99254 46.8341   High
cufflinks 43.1988 11.2467 75.1509 High High
cufflinks 14.4152 0.0 29.0084    
cufflinks 12.4782 1.80281 23.1535    
cufflinks 27.1328 4.80843 49.4572   High

0 Strain