Gene : Cre02.g113050 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  1003
Name:  ? Cre02.g113050 Secondary Identifier:  ? PAC:30785163
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7409 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g113050 0.5kb upstream 0.5kb upstream 3204 true chromosome_2: 6085916-6089119 Chlamydomonas reinhardtii
Cre02.g113050 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 6085916-6086415 Chlamydomonas reinhardtii
Cre02.g113050 0.5kb downstream 0.5kb downstream 3204 true chromosome_2: 6086416-6089619 Chlamydomonas reinhardtii
Cre02.g113050 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 6089120-6089619 Chlamydomonas reinhardtii
Cre02.g113050 1.0kb upstream 1.0kb upstream 3704 true chromosome_2: 6085416-6089119 Chlamydomonas reinhardtii
Cre02.g113050 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 6085416-6086415 Chlamydomonas reinhardtii
Cre02.g113050 1.0kb downstream 1.0kb downstream 3704 true chromosome_2: 6086416-6090119 Chlamydomonas reinhardtii
Cre02.g113050 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 6089120-6090119 Chlamydomonas reinhardtii
Cre02.g113050 2.0kb upstream 2.0kb upstream 4704 true chromosome_2: 6084416-6089119 Chlamydomonas reinhardtii
Cre02.g113050 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 6084416-6086415 Chlamydomonas reinhardtii
Cre02.g113050 2.0kb downstream 2.0kb downstream 4704 true chromosome_2: 6086416-6091119 Chlamydomonas reinhardtii
Cre02.g113050 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 6089120-6091119 Chlamydomonas reinhardtii
Cre02.g113050 5.0kb upstream 5.0kb upstream 7704 true chromosome_2: 6081416-6089119 Chlamydomonas reinhardtii
Cre02.g113050 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 6081416-6086415 Chlamydomonas reinhardtii
Cre02.g113050 5.0kb downstream 5.0kb downstream 7704 true chromosome_2: 6086416-6094119 Chlamydomonas reinhardtii
Cre02.g113050 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 6089120-6094119 Chlamydomonas reinhardtii
Cre02.g113050 10.0kb upstream 10.0kb upstream 12704 true chromosome_2: 6076416-6089119 Chlamydomonas reinhardtii
Cre02.g113050 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 6076416-6086415 Chlamydomonas reinhardtii
Cre02.g113050 10.0kb downstream 10.0kb downstream 12704 true chromosome_2: 6086416-6099119 Chlamydomonas reinhardtii
Cre02.g113050 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 6089120-6099119 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124079461 5260 Chlorophyte Singleton cluster - no MSA
123427418 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.192        
cufflinks 2.548        
cufflinks 4.144       High
cufflinks 2.504        
cufflinks 2.05        
cufflinks 2.125        
cufflinks 2.765        
cufflinks 2.859        
cufflinks 1.603       Low
cufflinks 3.437       High
cufflinks 1.901        
cufflinks 1.919        
cufflinks 4.075       High
cufflinks 2.131        
cufflinks 1.726        
cufflinks 1.798        
cufflinks 1.607       Low
cufflinks 4.341       High
cufflinks 1.545       Low
cufflinks 2.231        
cufflinks 1.877        
cufflinks 2.343        
cufflinks 2.029        
cufflinks 2.477        
cufflinks 1.662       Low
cufflinks 3.3374 0.243713 6.43108    
cufflinks 7.39588 0.986611 13.8051    
cufflinks 4.61168 0.0 10.2742    
cufflinks 3.81418 0.339727 7.28864    
cufflinks 4.42548 0.242193 8.60877    

0 Strain