Gene : Cre02.g116300 C. reinhardtii v5.6
Defline:  (1 of 1) K15171 - transcription elongation factor SPT4 (SUPT4H1, SPT4) Genomic Order:  1079
Name:  ? Cre02.g116300 Secondary Identifier:  ? PAC:30786360
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g116300 0.5kb upstream 0.5kb upstream 3202 true chromosome_2: 6486348-6489549 Chlamydomonas reinhardtii
Cre02.g116300 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 6486348-6486847 Chlamydomonas reinhardtii
Cre02.g116300 0.5kb downstream 0.5kb downstream 3202 true chromosome_2: 6486848-6490049 Chlamydomonas reinhardtii
Cre02.g116300 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 6489550-6490049 Chlamydomonas reinhardtii
Cre02.g116300 1.0kb upstream 1.0kb upstream 3702 true chromosome_2: 6485848-6489549 Chlamydomonas reinhardtii
Cre02.g116300 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 6485848-6486847 Chlamydomonas reinhardtii
Cre02.g116300 1.0kb downstream 1.0kb downstream 3702 true chromosome_2: 6486848-6490549 Chlamydomonas reinhardtii
Cre02.g116300 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 6489550-6490549 Chlamydomonas reinhardtii
Cre02.g116300 2.0kb upstream 2.0kb upstream 4702 true chromosome_2: 6484848-6489549 Chlamydomonas reinhardtii
Cre02.g116300 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 6484848-6486847 Chlamydomonas reinhardtii
Cre02.g116300 2.0kb downstream 2.0kb downstream 4702 true chromosome_2: 6486848-6491549 Chlamydomonas reinhardtii
Cre02.g116300 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 6489550-6491549 Chlamydomonas reinhardtii
Cre02.g116300 5.0kb upstream 5.0kb upstream 7702 true chromosome_2: 6481848-6489549 Chlamydomonas reinhardtii
Cre02.g116300 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 6481848-6486847 Chlamydomonas reinhardtii
Cre02.g116300 5.0kb downstream 5.0kb downstream 7702 true chromosome_2: 6486848-6494549 Chlamydomonas reinhardtii
Cre02.g116300 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 6489550-6494549 Chlamydomonas reinhardtii
Cre02.g116300 10.0kb upstream 10.0kb upstream 12702 true chromosome_2: 6476848-6489549 Chlamydomonas reinhardtii
Cre02.g116300 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 6476848-6486847 Chlamydomonas reinhardtii
Cre02.g116300 10.0kb downstream 10.0kb downstream 12702 true chromosome_2: 6486848-6499549 Chlamydomonas reinhardtii
Cre02.g116300 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 6489550-6499549 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110048 5260 Chlorophyte View MSA
123426410 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.019        
cufflinks 5.288        
cufflinks 4.498        
cufflinks 5.131        
cufflinks 5.443        
cufflinks 5.135        
cufflinks 4.877        
cufflinks 5.459        
cufflinks 4.718        
cufflinks 2.705       Low
cufflinks 4.131        
cufflinks 4.561        
cufflinks 4.224        
cufflinks 5.594       High
cufflinks 4.034        
cufflinks 5.908       High
cufflinks 2.514       Low
cufflinks 4.31        
cufflinks 1.806       Low
cufflinks 5.297        
cufflinks 3.444        
cufflinks 3.614        
cufflinks 3.789        
cufflinks 4.762        
cufflinks 3.229        
cufflinks 16.082 2.48411 29.68    
cufflinks 15.8206 4.21366 27.4275    
cufflinks 12.3642 0.0 25.2091    
cufflinks 10.0707 1.70734 18.4341   Low
cufflinks 19.1939 3.82861 34.5592   High

0 Strain