Gene : PUS9 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g095121 Defline:  (1 of 1) PTHR21600:SF11 - PSEUDOURIDINE SYNTHASE FAMILY PROTEIN
Genomic Order:  576 Name:  ? Cre02.g095121
Secondary Identifier:  ? PAC:30785798
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g095121 0.5kb upstream 0.5kb upstream 5882 true chromosome_2: 3476592-3482473 Chlamydomonas reinhardtii
Cre02.g095121 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 3476592-3477091 Chlamydomonas reinhardtii
Cre02.g095121 0.5kb downstream 0.5kb downstream 5882 true chromosome_2: 3477092-3482973 Chlamydomonas reinhardtii
Cre02.g095121 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 3482474-3482973 Chlamydomonas reinhardtii
Cre02.g095121 1.0kb upstream 1.0kb upstream 6382 true chromosome_2: 3476092-3482473 Chlamydomonas reinhardtii
Cre02.g095121 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 3476092-3477091 Chlamydomonas reinhardtii
Cre02.g095121 1.0kb downstream 1.0kb downstream 6382 true chromosome_2: 3477092-3483473 Chlamydomonas reinhardtii
Cre02.g095121 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 3482474-3483473 Chlamydomonas reinhardtii
Cre02.g095121 2.0kb upstream 2.0kb upstream 7382 true chromosome_2: 3475092-3482473 Chlamydomonas reinhardtii
Cre02.g095121 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 3475092-3477091 Chlamydomonas reinhardtii
Cre02.g095121 2.0kb downstream 2.0kb downstream 7382 true chromosome_2: 3477092-3484473 Chlamydomonas reinhardtii
Cre02.g095121 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 3482474-3484473 Chlamydomonas reinhardtii
Cre02.g095121 5.0kb upstream 5.0kb upstream 10382 true chromosome_2: 3472092-3482473 Chlamydomonas reinhardtii
Cre02.g095121 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 3472092-3477091 Chlamydomonas reinhardtii
Cre02.g095121 5.0kb downstream 5.0kb downstream 10382 true chromosome_2: 3477092-3487473 Chlamydomonas reinhardtii
Cre02.g095121 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 3482474-3487473 Chlamydomonas reinhardtii
Cre02.g095121 10.0kb upstream 10.0kb upstream 15382 true chromosome_2: 3467092-3482473 Chlamydomonas reinhardtii
Cre02.g095121 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 3467092-3477091 Chlamydomonas reinhardtii
Cre02.g095121 10.0kb downstream 10.0kb downstream 15382 true chromosome_2: 3477092-3492473 Chlamydomonas reinhardtii
Cre02.g095121 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 3482474-3492473 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111097 5260 Chlorophyte View MSA
123427017 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.775        
cufflinks 1.642        
cufflinks 1.034        
cufflinks 1.305        
cufflinks 1.214        
cufflinks 1.462        
cufflinks 1.39        
cufflinks 1.463        
cufflinks 0.64        
cufflinks 0.655        
cufflinks 1.49        
cufflinks 1.34        
cufflinks 0.937        
cufflinks 1.361        
cufflinks 1.302        
cufflinks 1.41        
cufflinks 0.176       Low
cufflinks 0.921        
cufflinks 0.797        
cufflinks 1.384        
cufflinks 1.294        
cufflinks 0.425       Low
cufflinks 1.327        
cufflinks 1.496        
cufflinks 0.314       Low
cufflinks 14.9583 1.47781 28.4387   High
cufflinks 7.61516 1.81728 13.413    
cufflinks 1.75192 0.0 4.10625    
cufflinks 3.69516 0.546923 6.84339   Low
cufflinks 6.31615 1.11887 11.5134    

0 Strain