Gene : PSY1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g095092 Defline:  (1 of 1) K02291 - phytoene synthase (crtB)
Genomic Order:  548 Name:  ? Cre02.g095092
Secondary Identifier:  ? PAC:30785417
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii CAROTENOID-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6287 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-6475 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g095092 0.5kb upstream 0.5kb upstream 4668 true chromosome_2: 3336147-3340814 Chlamydomonas reinhardtii
Cre02.g095092 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 3340315-3340814 Chlamydomonas reinhardtii
Cre02.g095092 0.5kb downstream 0.5kb downstream 4668 true chromosome_2: 3335647-3340314 Chlamydomonas reinhardtii
Cre02.g095092 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 3335647-3336146 Chlamydomonas reinhardtii
Cre02.g095092 1.0kb upstream 1.0kb upstream 5168 true chromosome_2: 3336147-3341314 Chlamydomonas reinhardtii
Cre02.g095092 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 3340315-3341314 Chlamydomonas reinhardtii
Cre02.g095092 1.0kb downstream 1.0kb downstream 5168 true chromosome_2: 3335147-3340314 Chlamydomonas reinhardtii
Cre02.g095092 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 3335147-3336146 Chlamydomonas reinhardtii
Cre02.g095092 2.0kb upstream 2.0kb upstream 6168 true chromosome_2: 3336147-3342314 Chlamydomonas reinhardtii
Cre02.g095092 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 3340315-3342314 Chlamydomonas reinhardtii
Cre02.g095092 2.0kb downstream 2.0kb downstream 6168 true chromosome_2: 3334147-3340314 Chlamydomonas reinhardtii
Cre02.g095092 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 3334147-3336146 Chlamydomonas reinhardtii
Cre02.g095092 5.0kb upstream 5.0kb upstream 9168 true chromosome_2: 3336147-3345314 Chlamydomonas reinhardtii
Cre02.g095092 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 3340315-3345314 Chlamydomonas reinhardtii
Cre02.g095092 5.0kb downstream 5.0kb downstream 9168 true chromosome_2: 3331147-3340314 Chlamydomonas reinhardtii
Cre02.g095092 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 3331147-3336146 Chlamydomonas reinhardtii
Cre02.g095092 10.0kb upstream 10.0kb upstream 14168 true chromosome_2: 3336147-3350314 Chlamydomonas reinhardtii
Cre02.g095092 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 3340315-3350314 Chlamydomonas reinhardtii
Cre02.g095092 10.0kb downstream 10.0kb downstream 14168 true chromosome_2: 3326147-3340314 Chlamydomonas reinhardtii
Cre02.g095092 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 3326147-3336146 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112788 5260 Chlorophyte View MSA
123426823 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.011     High  
cufflinks 31.698     High  
cufflinks 18.963     High  
cufflinks 32.915     High  
cufflinks 29.621     High  
cufflinks 34.008     High  
cufflinks 18.862     High  
cufflinks 36.384     High  
cufflinks 34.374     High  
cufflinks 12.223     High Low
cufflinks 17.502     High  
cufflinks 36.799     High  
cufflinks 18.538     High  
cufflinks 33.889     High  
cufflinks 29.355     High  
cufflinks 41.157     High  
cufflinks 53.052     High High
cufflinks 27.56     High  
cufflinks 3.114       Low
cufflinks 13.285     High Low
cufflinks 31.514     High  
cufflinks 45.816     High  
cufflinks 33.523     High  
cufflinks 29.449     High  
cufflinks 56.182     High High
cufflinks 148.681 0.0 302.659 High High
cufflinks 47.7319 9.70717 85.7567 High  
cufflinks 55.4927 0.0 115.505 High  
cufflinks 33.3037 0.0 66.9816 High  
cufflinks 36.1036 3.62724 68.5799 High  

0 Strain