Gene : Cre02.g098300 C. reinhardtii v5.6
Defline:  (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) Genomic Order:  679
Name:  ? Cre02.g098300 Secondary Identifier:  ? PAC:30784884
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g098300 0.5kb upstream 0.5kb upstream 4708 true chromosome_2: 4165684-4170391 Chlamydomonas reinhardtii
Cre02.g098300 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 4169892-4170391 Chlamydomonas reinhardtii
Cre02.g098300 0.5kb downstream 0.5kb downstream 4708 true chromosome_2: 4165184-4169891 Chlamydomonas reinhardtii
Cre02.g098300 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 4165184-4165683 Chlamydomonas reinhardtii
Cre02.g098300 1.0kb upstream 1.0kb upstream 5208 true chromosome_2: 4165684-4170891 Chlamydomonas reinhardtii
Cre02.g098300 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 4169892-4170891 Chlamydomonas reinhardtii
Cre02.g098300 1.0kb downstream 1.0kb downstream 5208 true chromosome_2: 4164684-4169891 Chlamydomonas reinhardtii
Cre02.g098300 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 4164684-4165683 Chlamydomonas reinhardtii
Cre02.g098300 2.0kb upstream 2.0kb upstream 6208 true chromosome_2: 4165684-4171891 Chlamydomonas reinhardtii
Cre02.g098300 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 4169892-4171891 Chlamydomonas reinhardtii
Cre02.g098300 2.0kb downstream 2.0kb downstream 6208 true chromosome_2: 4163684-4169891 Chlamydomonas reinhardtii
Cre02.g098300 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 4163684-4165683 Chlamydomonas reinhardtii
Cre02.g098300 5.0kb upstream 5.0kb upstream 9208 true chromosome_2: 4165684-4174891 Chlamydomonas reinhardtii
Cre02.g098300 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 4169892-4174891 Chlamydomonas reinhardtii
Cre02.g098300 5.0kb downstream 5.0kb downstream 9208 true chromosome_2: 4160684-4169891 Chlamydomonas reinhardtii
Cre02.g098300 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 4160684-4165683 Chlamydomonas reinhardtii
Cre02.g098300 10.0kb upstream 10.0kb upstream 14208 true chromosome_2: 4165684-4179891 Chlamydomonas reinhardtii
Cre02.g098300 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 4169892-4179891 Chlamydomonas reinhardtii
Cre02.g098300 10.0kb downstream 10.0kb downstream 14208 true chromosome_2: 4155684-4169891 Chlamydomonas reinhardtii
Cre02.g098300 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 4155684-4165683 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110845 5260 Chlorophyte View MSA
123428580 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 2.431        
cufflinks 2.318        
cufflinks 1.834        
cufflinks 0.848        
cufflinks 1.509        
cufflinks 2.494        
cufflinks 2.893        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.076       Low
cufflinks 1.318        
cufflinks 2.124        
cufflinks 0.45        
cufflinks 0.958        
cufflinks 1.511        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.092        
cufflinks 0.012     Low Low
cufflinks 0.381        
cufflinks 0.311        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.259       High
cufflinks 1.158        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.609579 0.0 1.25945   Low
cufflinks 2.86337 0.147533 5.5792    
cufflinks 2.97416 0.0 6.43389    
cufflinks 2.83711 0.396342 5.27788    
cufflinks 3.76087 0.512388 7.00935    

0 Strain