Gene : Cre02.g098100 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR14134//PTHR14134:SF3 - E3 UBIQUITIN-PROTEIN LIGASE RAD18 // SUBFAMILY NOT NAMED Genomic Order:  675
Name:  ? Cre02.g098100 Secondary Identifier:  ? PAC:30786135
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-7511 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g098100 0.5kb upstream 0.5kb upstream 4396 true chromosome_2: 4148300-4152695 Chlamydomonas reinhardtii
Cre02.g098100 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 4152196-4152695 Chlamydomonas reinhardtii
Cre02.g098100 0.5kb downstream 0.5kb downstream 4396 true chromosome_2: 4147800-4152195 Chlamydomonas reinhardtii
Cre02.g098100 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 4147800-4148299 Chlamydomonas reinhardtii
Cre02.g098100 1.0kb upstream 1.0kb upstream 4896 true chromosome_2: 4148300-4153195 Chlamydomonas reinhardtii
Cre02.g098100 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 4152196-4153195 Chlamydomonas reinhardtii
Cre02.g098100 1.0kb downstream 1.0kb downstream 4896 true chromosome_2: 4147300-4152195 Chlamydomonas reinhardtii
Cre02.g098100 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 4147300-4148299 Chlamydomonas reinhardtii
Cre02.g098100 2.0kb upstream 2.0kb upstream 5896 true chromosome_2: 4148300-4154195 Chlamydomonas reinhardtii
Cre02.g098100 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 4152196-4154195 Chlamydomonas reinhardtii
Cre02.g098100 2.0kb downstream 2.0kb downstream 5896 true chromosome_2: 4146300-4152195 Chlamydomonas reinhardtii
Cre02.g098100 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 4146300-4148299 Chlamydomonas reinhardtii
Cre02.g098100 5.0kb upstream 5.0kb upstream 8896 true chromosome_2: 4148300-4157195 Chlamydomonas reinhardtii
Cre02.g098100 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 4152196-4157195 Chlamydomonas reinhardtii
Cre02.g098100 5.0kb downstream 5.0kb downstream 8896 true chromosome_2: 4143300-4152195 Chlamydomonas reinhardtii
Cre02.g098100 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 4143300-4148299 Chlamydomonas reinhardtii
Cre02.g098100 10.0kb upstream 10.0kb upstream 13896 true chromosome_2: 4148300-4162195 Chlamydomonas reinhardtii
Cre02.g098100 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 4152196-4162195 Chlamydomonas reinhardtii
Cre02.g098100 10.0kb downstream 10.0kb downstream 13896 true chromosome_2: 4138300-4152195 Chlamydomonas reinhardtii
Cre02.g098100 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 4138300-4148299 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111034 5260 Chlorophyte View MSA
123423203 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.301        
cufflinks 0.549        
cufflinks 0.301        
cufflinks 0.424        
cufflinks 0.447        
cufflinks 0.469        
cufflinks 0.337        
cufflinks 0.589        
cufflinks 0.271        
cufflinks 0.084       Low
cufflinks 0.385        
cufflinks 0.577        
cufflinks 0.147       Low
cufflinks 0.472        
cufflinks 0.435        
cufflinks 0.538        
cufflinks 0.414        
cufflinks 0.336        
cufflinks 0.138       Low
cufflinks 0.632       High
cufflinks 0.386        
cufflinks 0.394        
cufflinks 0.519        
cufflinks 0.412        
cufflinks 0.499        
cufflinks 0.557567 0.0 1.20349    
cufflinks 1.85576 0.0 4.04264   Low
cufflinks 1.94425 0.0 4.74385    
cufflinks 1.61466 0.0 3.23524    
cufflinks 2.48456 0.0195246 4.94959    

0 Strain