Gene : Cre02.g097550 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12532:SF0 - TRANSCRIPTIONAL REGULATORY PROTEIN HAH1-RELATED Genomic Order:  666
Name:  ? Cre02.g097550 Secondary Identifier:  ? PAC:30785070
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g097550 0.5kb upstream 0.5kb upstream 4398 true chromosome_2: 4083750-4088147 Chlamydomonas reinhardtii
Cre02.g097550 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 4087648-4088147 Chlamydomonas reinhardtii
Cre02.g097550 0.5kb downstream 0.5kb downstream 4398 true chromosome_2: 4083250-4087647 Chlamydomonas reinhardtii
Cre02.g097550 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 4083250-4083749 Chlamydomonas reinhardtii
Cre02.g097550 1.0kb upstream 1.0kb upstream 4898 true chromosome_2: 4083750-4088647 Chlamydomonas reinhardtii
Cre02.g097550 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 4087648-4088647 Chlamydomonas reinhardtii
Cre02.g097550 1.0kb downstream 1.0kb downstream 4898 true chromosome_2: 4082750-4087647 Chlamydomonas reinhardtii
Cre02.g097550 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 4082750-4083749 Chlamydomonas reinhardtii
Cre02.g097550 2.0kb upstream 2.0kb upstream 5898 true chromosome_2: 4083750-4089647 Chlamydomonas reinhardtii
Cre02.g097550 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 4087648-4089647 Chlamydomonas reinhardtii
Cre02.g097550 2.0kb downstream 2.0kb downstream 5898 true chromosome_2: 4081750-4087647 Chlamydomonas reinhardtii
Cre02.g097550 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 4081750-4083749 Chlamydomonas reinhardtii
Cre02.g097550 5.0kb upstream 5.0kb upstream 8898 true chromosome_2: 4083750-4092647 Chlamydomonas reinhardtii
Cre02.g097550 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 4087648-4092647 Chlamydomonas reinhardtii
Cre02.g097550 5.0kb downstream 5.0kb downstream 8898 true chromosome_2: 4078750-4087647 Chlamydomonas reinhardtii
Cre02.g097550 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 4078750-4083749 Chlamydomonas reinhardtii
Cre02.g097550 10.0kb upstream 10.0kb upstream 13898 true chromosome_2: 4083750-4097647 Chlamydomonas reinhardtii
Cre02.g097550 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 4087648-4097647 Chlamydomonas reinhardtii
Cre02.g097550 10.0kb downstream 10.0kb downstream 13898 true chromosome_2: 4073750-4087647 Chlamydomonas reinhardtii
Cre02.g097550 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 4073750-4083749 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108713 5260 Chlorophyte View MSA
123424346 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.841     High High
cufflinks 7.474        
cufflinks 4.246        
cufflinks 4.065        
cufflinks 7.384        
cufflinks 7.31        
cufflinks 2.444       Low
cufflinks 5.085        
cufflinks 17.05     High High
cufflinks 5.121        
cufflinks 4.046        
cufflinks 4.947        
cufflinks 5.379        
cufflinks 7.353        
cufflinks 4.312        
cufflinks 15.02     High High
cufflinks 7.716        
cufflinks 4.823        
cufflinks 1.303       Low
cufflinks 2.255       Low
cufflinks 5.073        
cufflinks 8.217        
cufflinks 3.161        
cufflinks 5.621        
cufflinks 8.017        
cufflinks 8.53258 1.25886 15.8063   Low
cufflinks 7.81 2.13216 13.4878    
cufflinks 0.969895 0.0 2.39484   Low
cufflinks 6.28353 1.03343 11.5336   Low
cufflinks 16.8077 2.9606 30.6547   High

0 Strain