Gene : PDC2 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g099850 Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC
Genomic Order:  711 Name:  ? Cre02.g099850
Secondary Identifier:  ? PAC:30785418
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-5464 Chlamydomonas reinhardtii pathologic  
Creinhardtii PYRUVDEHYD-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g099850 0.5kb upstream 0.5kb upstream 8102 true chromosome_2: 4420781-4428882 Chlamydomonas reinhardtii
Cre02.g099850 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 4420781-4421280 Chlamydomonas reinhardtii
Cre02.g099850 0.5kb downstream 0.5kb downstream 8102 true chromosome_2: 4421281-4429382 Chlamydomonas reinhardtii
Cre02.g099850 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 4428883-4429382 Chlamydomonas reinhardtii
Cre02.g099850 1.0kb upstream 1.0kb upstream 8602 true chromosome_2: 4420281-4428882 Chlamydomonas reinhardtii
Cre02.g099850 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 4420281-4421280 Chlamydomonas reinhardtii
Cre02.g099850 1.0kb downstream 1.0kb downstream 8602 true chromosome_2: 4421281-4429882 Chlamydomonas reinhardtii
Cre02.g099850 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 4428883-4429882 Chlamydomonas reinhardtii
Cre02.g099850 2.0kb upstream 2.0kb upstream 9602 true chromosome_2: 4419281-4428882 Chlamydomonas reinhardtii
Cre02.g099850 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 4419281-4421280 Chlamydomonas reinhardtii
Cre02.g099850 2.0kb downstream 2.0kb downstream 9602 true chromosome_2: 4421281-4430882 Chlamydomonas reinhardtii
Cre02.g099850 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 4428883-4430882 Chlamydomonas reinhardtii
Cre02.g099850 5.0kb upstream 5.0kb upstream 12602 true chromosome_2: 4416281-4428882 Chlamydomonas reinhardtii
Cre02.g099850 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 4416281-4421280 Chlamydomonas reinhardtii
Cre02.g099850 5.0kb downstream 5.0kb downstream 12602 true chromosome_2: 4421281-4433882 Chlamydomonas reinhardtii
Cre02.g099850 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 4428883-4433882 Chlamydomonas reinhardtii
Cre02.g099850 10.0kb upstream 10.0kb upstream 17602 true chromosome_2: 4411281-4428882 Chlamydomonas reinhardtii
Cre02.g099850 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 4411281-4421280 Chlamydomonas reinhardtii
Cre02.g099850 10.0kb downstream 10.0kb downstream 17602 true chromosome_2: 4421281-4438882 Chlamydomonas reinhardtii
Cre02.g099850 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 4428883-4438882 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111186 5260 Chlorophyte View MSA
123423942 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.296     High High
cufflinks 38.473     High  
cufflinks 25.55     High  
cufflinks 37.928     High  
cufflinks 32.631     High  
cufflinks 30.945     High  
cufflinks 12.862       Low
cufflinks 40.934     High  
cufflinks 62.367     High High
cufflinks 22.389     High  
cufflinks 25.968     High  
cufflinks 33.844     High  
cufflinks 28.147     High  
cufflinks 35.832     High  
cufflinks 26.751     High  
cufflinks 57.591     High High
cufflinks 70.035     High High
cufflinks 31.988     High  
cufflinks 12.359     High Low
cufflinks 16.919     High Low
cufflinks 31.455     High  
cufflinks 56.818     High High
cufflinks 16.486     High Low
cufflinks 38.834     High  
cufflinks 65.294     High High
cufflinks 65.9324 0.0 134.927 High Low
cufflinks 110.979 18.528 203.431 High  
cufflinks 51.3705 0.0 106.289 High  
cufflinks 55.4411 0.0 113.104 High  
cufflinks 58.9877 4.33763 113.638 High Low

0 Strain