Gene : Cre02.g104250 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR18945//PTHR18945:SF559 - NEUROTRANSMITTER GATED ION CHANNEL // PROTEIN LGC-12 Genomic Order:  810
Name:  ? Cre02.g104250 Secondary Identifier:  ? PAC:30785254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g104250 0.5kb upstream 0.5kb upstream 13246 true chromosome_2: 5002840-5016085 Chlamydomonas reinhardtii
Cre02.g104250 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 5015586-5016085 Chlamydomonas reinhardtii
Cre02.g104250 0.5kb downstream 0.5kb downstream 13246 true chromosome_2: 5002340-5015585 Chlamydomonas reinhardtii
Cre02.g104250 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 5002340-5002839 Chlamydomonas reinhardtii
Cre02.g104250 1.0kb upstream 1.0kb upstream 13746 true chromosome_2: 5002840-5016585 Chlamydomonas reinhardtii
Cre02.g104250 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 5015586-5016585 Chlamydomonas reinhardtii
Cre02.g104250 1.0kb downstream 1.0kb downstream 13746 true chromosome_2: 5001840-5015585 Chlamydomonas reinhardtii
Cre02.g104250 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 5001840-5002839 Chlamydomonas reinhardtii
Cre02.g104250 2.0kb upstream 2.0kb upstream 14746 true chromosome_2: 5002840-5017585 Chlamydomonas reinhardtii
Cre02.g104250 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 5015586-5017585 Chlamydomonas reinhardtii
Cre02.g104250 2.0kb downstream 2.0kb downstream 14746 true chromosome_2: 5000840-5015585 Chlamydomonas reinhardtii
Cre02.g104250 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 5000840-5002839 Chlamydomonas reinhardtii
Cre02.g104250 5.0kb upstream 5.0kb upstream 17746 true chromosome_2: 5002840-5020585 Chlamydomonas reinhardtii
Cre02.g104250 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 5015586-5020585 Chlamydomonas reinhardtii
Cre02.g104250 5.0kb downstream 5.0kb downstream 17746 true chromosome_2: 4997840-5015585 Chlamydomonas reinhardtii
Cre02.g104250 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 4997840-5002839 Chlamydomonas reinhardtii
Cre02.g104250 10.0kb upstream 10.0kb upstream 22746 true chromosome_2: 5002840-5025585 Chlamydomonas reinhardtii
Cre02.g104250 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 5015586-5025585 Chlamydomonas reinhardtii
Cre02.g104250 10.0kb downstream 10.0kb downstream 22746 true chromosome_2: 4992840-5015585 Chlamydomonas reinhardtii
Cre02.g104250 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 4992840-5002839 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124079482 5260 Chlorophyte Singleton cluster - no MSA
123397338 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low Low
cufflinks 0.235        
cufflinks 0.492       High
cufflinks 0.154     Low  
cufflinks 0.175        
cufflinks 0.227        
cufflinks 0.283        
cufflinks 0.244        
cufflinks 0.056     Low Low
cufflinks 0.105        
cufflinks 0.189        
cufflinks 0.229        
cufflinks 0.267        
cufflinks 0.26        
cufflinks 0.112     Low  
cufflinks 0.072     Low  
cufflinks 0.108     Low  
cufflinks 0.243        
cufflinks 0.078        
cufflinks 0.302        
cufflinks 0.166        
cufflinks 0.051     Low Low
cufflinks 0.374       High
cufflinks 0.205     Low  
cufflinks 0.054     Low Low
cufflinks 0.0847172 0.0 0.189486 Low Low
cufflinks 0.769389 0.0 1.56666    
cufflinks 3.81032 0.0 7.66915   High
cufflinks 0.20551 0.0 0.430409 Low  
cufflinks 2.45803 0.472298 4.44376    

0 Strain