Gene : AOD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre02.g105500 Defline:  (1 of 1) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase
Genomic Order:  840 Name:  ? Cre02.g105500
Secondary Identifier:  ? PAC:30785276
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii ARGSYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii GLUTORN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g105500 0.5kb upstream 0.5kb upstream 6769 true chromosome_2: 5171437-5178205 Chlamydomonas reinhardtii
Cre02.g105500 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 5177706-5178205 Chlamydomonas reinhardtii
Cre02.g105500 0.5kb downstream 0.5kb downstream 6769 true chromosome_2: 5170937-5177705 Chlamydomonas reinhardtii
Cre02.g105500 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 5170937-5171436 Chlamydomonas reinhardtii
Cre02.g105500 1.0kb upstream 1.0kb upstream 7269 true chromosome_2: 5171437-5178705 Chlamydomonas reinhardtii
Cre02.g105500 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 5177706-5178705 Chlamydomonas reinhardtii
Cre02.g105500 1.0kb downstream 1.0kb downstream 7269 true chromosome_2: 5170437-5177705 Chlamydomonas reinhardtii
Cre02.g105500 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 5170437-5171436 Chlamydomonas reinhardtii
Cre02.g105500 2.0kb upstream 2.0kb upstream 8269 true chromosome_2: 5171437-5179705 Chlamydomonas reinhardtii
Cre02.g105500 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 5177706-5179705 Chlamydomonas reinhardtii
Cre02.g105500 2.0kb downstream 2.0kb downstream 8269 true chromosome_2: 5169437-5177705 Chlamydomonas reinhardtii
Cre02.g105500 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 5169437-5171436 Chlamydomonas reinhardtii
Cre02.g105500 5.0kb upstream 5.0kb upstream 11269 true chromosome_2: 5171437-5182705 Chlamydomonas reinhardtii
Cre02.g105500 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 5177706-5182705 Chlamydomonas reinhardtii
Cre02.g105500 5.0kb downstream 5.0kb downstream 11269 true chromosome_2: 5166437-5177705 Chlamydomonas reinhardtii
Cre02.g105500 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 5166437-5171436 Chlamydomonas reinhardtii
Cre02.g105500 10.0kb upstream 10.0kb upstream 16269 true chromosome_2: 5171437-5187705 Chlamydomonas reinhardtii
Cre02.g105500 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 5177706-5187705 Chlamydomonas reinhardtii
Cre02.g105500 10.0kb downstream 10.0kb downstream 16269 true chromosome_2: 5161437-5177705 Chlamydomonas reinhardtii
Cre02.g105500 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 5161437-5171436 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124112653 5260 Chlorophyte View MSA
123425283 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.487       Low
cufflinks 5.236        
cufflinks 11.661       High
cufflinks 10.08       High
cufflinks 5.218        
cufflinks 4.984        
cufflinks 7.908        
cufflinks 9.961       High
cufflinks 1.399       Low
cufflinks 2.184       Low
cufflinks 11.74       High
cufflinks 5.935        
cufflinks 5.237        
cufflinks 4.818        
cufflinks 5.152        
cufflinks 1.741       Low
cufflinks 4.626        
cufflinks 7.251        
cufflinks 2.435       Low
cufflinks 10.128       High
cufflinks 5.145        
cufflinks 2.927        
cufflinks 6.138        
cufflinks 10.98       High
cufflinks 3.807        
cufflinks 12.7731 1.44197 24.1043   High
cufflinks 14.6617 3.97929 25.3441    
cufflinks 29.9624 0.0 60.8914 High High
cufflinks 18.0707 1.4476 34.6937   High
cufflinks 18.2502 3.15034 33.3501    

0 Strain