Gene : Cre03.g145707 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR13060 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 Genomic Order:  101
Name:  ? Cre03.g145707 Secondary Identifier:  ? PAC:30788279
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g145707 0.5kb upstream 0.5kb upstream 4196 true chromosome_3: 618692-622887 Chlamydomonas reinhardtii
Cre03.g145707 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 622388-622887 Chlamydomonas reinhardtii
Cre03.g145707 0.5kb downstream 0.5kb downstream 4196 true chromosome_3: 618192-622387 Chlamydomonas reinhardtii
Cre03.g145707 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 618192-618691 Chlamydomonas reinhardtii
Cre03.g145707 1.0kb upstream 1.0kb upstream 4696 true chromosome_3: 618692-623387 Chlamydomonas reinhardtii
Cre03.g145707 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 622388-623387 Chlamydomonas reinhardtii
Cre03.g145707 1.0kb downstream 1.0kb downstream 4696 true chromosome_3: 617692-622387 Chlamydomonas reinhardtii
Cre03.g145707 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 617692-618691 Chlamydomonas reinhardtii
Cre03.g145707 2.0kb upstream 2.0kb upstream 5696 true chromosome_3: 618692-624387 Chlamydomonas reinhardtii
Cre03.g145707 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 622388-624387 Chlamydomonas reinhardtii
Cre03.g145707 2.0kb downstream 2.0kb downstream 5696 true chromosome_3: 616692-622387 Chlamydomonas reinhardtii
Cre03.g145707 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 616692-618691 Chlamydomonas reinhardtii
Cre03.g145707 5.0kb upstream 5.0kb upstream 8696 true chromosome_3: 618692-627387 Chlamydomonas reinhardtii
Cre03.g145707 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 622388-627387 Chlamydomonas reinhardtii
Cre03.g145707 5.0kb downstream 5.0kb downstream 8696 true chromosome_3: 613692-622387 Chlamydomonas reinhardtii
Cre03.g145707 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 613692-618691 Chlamydomonas reinhardtii
Cre03.g145707 10.0kb upstream 10.0kb upstream 13696 true chromosome_3: 618692-632387 Chlamydomonas reinhardtii
Cre03.g145707 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 622388-632387 Chlamydomonas reinhardtii
Cre03.g145707 10.0kb downstream 10.0kb downstream 13696 true chromosome_3: 608692-622387 Chlamydomonas reinhardtii
Cre03.g145707 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 608692-618691 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111288 5260 Chlorophyte View MSA
123424797 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.247        
cufflinks 0.499        
cufflinks 0.303        
cufflinks 0.344        
cufflinks 0.387        
cufflinks 0.314        
cufflinks 0.361        
cufflinks 0.434        
cufflinks 0.4        
cufflinks 0.048     Low Low
cufflinks 0.367        
cufflinks 0.432        
cufflinks 0.029     Low Low
cufflinks 0.383        
cufflinks 0.275        
cufflinks 0.467        
cufflinks 0.336        
cufflinks 0.274        
cufflinks 0.063     Low Low
cufflinks 0.277        
cufflinks 0.394        
cufflinks 0.338        
cufflinks 0.261        
cufflinks 0.389        
cufflinks 0.384        
cufflinks 2.02441 0.116212 3.9326   Low
cufflinks 1.94378 0.0 4.1522   High
cufflinks 0.518498 0.0 1.49851    
cufflinks 0.870723 0.0 1.80078    
cufflinks 1.47248 0.0 3.07278   High

0 Strain