Gene : TRS31 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g146467 Defline:  (1 of 1) PTHR20902//PTHR20902:SF0 - 41-2 PROTEIN ANTIGEN-RELATED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 5
Genomic Order:  139 Name:  ? Cre03.g146467
Secondary Identifier:  ? PAC:30788224
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g146467 0.5kb upstream 0.5kb upstream 3792 true chromosome_3: 826874-830665 Chlamydomonas reinhardtii
Cre03.g146467 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 826874-827373 Chlamydomonas reinhardtii
Cre03.g146467 0.5kb downstream 0.5kb downstream 3792 true chromosome_3: 827374-831165 Chlamydomonas reinhardtii
Cre03.g146467 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 830666-831165 Chlamydomonas reinhardtii
Cre03.g146467 1.0kb upstream 1.0kb upstream 4292 true chromosome_3: 826374-830665 Chlamydomonas reinhardtii
Cre03.g146467 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 826374-827373 Chlamydomonas reinhardtii
Cre03.g146467 1.0kb downstream 1.0kb downstream 4292 true chromosome_3: 827374-831665 Chlamydomonas reinhardtii
Cre03.g146467 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 830666-831665 Chlamydomonas reinhardtii
Cre03.g146467 2.0kb upstream 2.0kb upstream 5292 true chromosome_3: 825374-830665 Chlamydomonas reinhardtii
Cre03.g146467 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 825374-827373 Chlamydomonas reinhardtii
Cre03.g146467 2.0kb downstream 2.0kb downstream 5292 true chromosome_3: 827374-832665 Chlamydomonas reinhardtii
Cre03.g146467 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 830666-832665 Chlamydomonas reinhardtii
Cre03.g146467 5.0kb upstream 5.0kb upstream 8292 true chromosome_3: 822374-830665 Chlamydomonas reinhardtii
Cre03.g146467 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 822374-827373 Chlamydomonas reinhardtii
Cre03.g146467 5.0kb downstream 5.0kb downstream 8292 true chromosome_3: 827374-835665 Chlamydomonas reinhardtii
Cre03.g146467 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 830666-835665 Chlamydomonas reinhardtii
Cre03.g146467 10.0kb upstream 10.0kb upstream 13292 true chromosome_3: 817374-830665 Chlamydomonas reinhardtii
Cre03.g146467 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 817374-827373 Chlamydomonas reinhardtii
Cre03.g146467 10.0kb downstream 10.0kb downstream 13292 true chromosome_3: 827374-840665 Chlamydomonas reinhardtii
Cre03.g146467 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 830666-840665 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108905 5260 Chlorophyte View MSA
123425941 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.444       Low
cufflinks 8.186        
cufflinks 12.238       High
cufflinks 10.971        
cufflinks 8.156        
cufflinks 9.873        
cufflinks 12.092       High
cufflinks 13.848       High
cufflinks 5.257       Low
cufflinks 4.975       Low
cufflinks 8.715        
cufflinks 10.335        
cufflinks 14.833     High High
cufflinks 8.046        
cufflinks 8.63        
cufflinks 7.41        
cufflinks 9.556        
cufflinks 8.387        
cufflinks 6.703     High Low
cufflinks 12.067       High
cufflinks 8.867        
cufflinks 7.532        
cufflinks 11.087        
cufflinks 11.786        
cufflinks 8.649        
cufflinks 11.2821 1.68673 20.8775   High
cufflinks 7.50366 1.44696 13.5604   Low
cufflinks 11.8331 0.0 23.8541    
cufflinks 11.0111 1.65013 20.3721    
cufflinks 9.51147 1.85727 17.1657    

0 Strain