Gene : Cre03.g152550 C. reinhardtii v5.6
Defline:  (1 of 1) KOG0265//KOG0266//KOG0271//KOG0315//KOG0645 - U5 snRNP-specific protein-like factor and related proteins // WD40 repeat-containing protein // Notchless-like WD40 repeat-containing protein // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat protein Genomic Order:  254
Name:  ? Cre03.g152550 Secondary Identifier:  ? PAC:30787446
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g152550 0.5kb upstream 0.5kb upstream 14452 true chromosome_3: 1582642-1597093 Chlamydomonas reinhardtii
Cre03.g152550 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 1582642-1583141 Chlamydomonas reinhardtii
Cre03.g152550 0.5kb downstream 0.5kb downstream 14452 true chromosome_3: 1583142-1597593 Chlamydomonas reinhardtii
Cre03.g152550 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 1597094-1597593 Chlamydomonas reinhardtii
Cre03.g152550 1.0kb upstream 1.0kb upstream 14952 true chromosome_3: 1582142-1597093 Chlamydomonas reinhardtii
Cre03.g152550 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 1582142-1583141 Chlamydomonas reinhardtii
Cre03.g152550 1.0kb downstream 1.0kb downstream 14952 true chromosome_3: 1583142-1598093 Chlamydomonas reinhardtii
Cre03.g152550 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 1597094-1598093 Chlamydomonas reinhardtii
Cre03.g152550 2.0kb upstream 2.0kb upstream 15952 true chromosome_3: 1581142-1597093 Chlamydomonas reinhardtii
Cre03.g152550 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 1581142-1583141 Chlamydomonas reinhardtii
Cre03.g152550 2.0kb downstream 2.0kb downstream 15952 true chromosome_3: 1583142-1599093 Chlamydomonas reinhardtii
Cre03.g152550 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 1597094-1599093 Chlamydomonas reinhardtii
Cre03.g152550 5.0kb upstream 5.0kb upstream 18952 true chromosome_3: 1578142-1597093 Chlamydomonas reinhardtii
Cre03.g152550 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 1578142-1583141 Chlamydomonas reinhardtii
Cre03.g152550 5.0kb downstream 5.0kb downstream 18952 true chromosome_3: 1583142-1602093 Chlamydomonas reinhardtii
Cre03.g152550 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 1597094-1602093 Chlamydomonas reinhardtii
Cre03.g152550 10.0kb upstream 10.0kb upstream 23952 true chromosome_3: 1573142-1597093 Chlamydomonas reinhardtii
Cre03.g152550 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 1573142-1583141 Chlamydomonas reinhardtii
Cre03.g152550 10.0kb downstream 10.0kb downstream 23952 true chromosome_3: 1583142-1607093 Chlamydomonas reinhardtii
Cre03.g152550 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 1597094-1607093 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124076142 5260 Chlorophyte View MSA
123394261 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.09       Low
cufflinks 0.69        
cufflinks 0.491        
cufflinks 1.17       High
cufflinks 0.397        
cufflinks 0.406        
cufflinks 0.55        
cufflinks 1.017       High
cufflinks 0.263        
cufflinks 0.109       Low
cufflinks 1.09       High
cufflinks 0.719        
cufflinks 0.147       Low
cufflinks 0.49        
cufflinks 0.714        
cufflinks 0.205       Low
cufflinks 0.324        
cufflinks 0.602        
cufflinks 0.157       Low
cufflinks 0.903       High
cufflinks 1.023       High
cufflinks 0.348        
cufflinks 0.348        
cufflinks 0.874        
cufflinks 0.336        
cufflinks 0.276541 0.0 0.571361   High
cufflinks 2.69852 0.616221 4.78082    
cufflinks 2.20192 0.0 4.56709    
cufflinks 1.75637 0.290103 3.22263   High
cufflinks 1.75298 0.28433 3.22162   Low

0 Strain