Gene : Cre03.g154500 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR13027 - SAND PROTEIN-RELATED Genomic Order:  295
Name:  ? Cre03.g154500 Secondary Identifier:  ? PAC:30786748
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g154500 0.5kb upstream 0.5kb upstream 5592 true chromosome_3: 1827972-1833563 Chlamydomonas reinhardtii
Cre03.g154500 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 1827972-1828471 Chlamydomonas reinhardtii
Cre03.g154500 0.5kb downstream 0.5kb downstream 5592 true chromosome_3: 1828472-1834063 Chlamydomonas reinhardtii
Cre03.g154500 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 1833564-1834063 Chlamydomonas reinhardtii
Cre03.g154500 1.0kb upstream 1.0kb upstream 6092 true chromosome_3: 1827472-1833563 Chlamydomonas reinhardtii
Cre03.g154500 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 1827472-1828471 Chlamydomonas reinhardtii
Cre03.g154500 1.0kb downstream 1.0kb downstream 6092 true chromosome_3: 1828472-1834563 Chlamydomonas reinhardtii
Cre03.g154500 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 1833564-1834563 Chlamydomonas reinhardtii
Cre03.g154500 2.0kb upstream 2.0kb upstream 7092 true chromosome_3: 1826472-1833563 Chlamydomonas reinhardtii
Cre03.g154500 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 1826472-1828471 Chlamydomonas reinhardtii
Cre03.g154500 2.0kb downstream 2.0kb downstream 7092 true chromosome_3: 1828472-1835563 Chlamydomonas reinhardtii
Cre03.g154500 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 1833564-1835563 Chlamydomonas reinhardtii
Cre03.g154500 5.0kb upstream 5.0kb upstream 10092 true chromosome_3: 1823472-1833563 Chlamydomonas reinhardtii
Cre03.g154500 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 1823472-1828471 Chlamydomonas reinhardtii
Cre03.g154500 5.0kb downstream 5.0kb downstream 10092 true chromosome_3: 1828472-1838563 Chlamydomonas reinhardtii
Cre03.g154500 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 1833564-1838563 Chlamydomonas reinhardtii
Cre03.g154500 10.0kb upstream 10.0kb upstream 15092 true chromosome_3: 1818472-1833563 Chlamydomonas reinhardtii
Cre03.g154500 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 1818472-1828471 Chlamydomonas reinhardtii
Cre03.g154500 10.0kb downstream 10.0kb downstream 15092 true chromosome_3: 1828472-1843563 Chlamydomonas reinhardtii
Cre03.g154500 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 1833564-1843563 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111571 5260 Chlorophyte View MSA
123428228 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.504       High
cufflinks 0.556       Low
cufflinks 1.696       High
cufflinks 1.102        
cufflinks 0.915        
cufflinks 1.495       High
cufflinks 1.33        
cufflinks 1.826       High
cufflinks 0.973        
cufflinks 0.582       Low
cufflinks 0.674       Low
cufflinks 1.33        
cufflinks 1.177        
cufflinks 1.363        
cufflinks 1.06        
cufflinks 0.897        
cufflinks 0.708        
cufflinks 1.13        
cufflinks 0.315       Low
cufflinks 1.276        
cufflinks 1.092        
cufflinks 0.795        
cufflinks 1.043        
cufflinks 1.053        
cufflinks 0.917        
cufflinks 0.628648 0.0 1.31634   Low
cufflinks 3.93037 0.326123 7.53462    
cufflinks 2.06116 0.0 4.83106    
cufflinks 2.22573 0.182675 4.26879    
cufflinks 4.93609 0.78172 9.09046   High

0 Strain