Gene : Cre03.g154200 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR15970//PTHR15970:SF2 - FAMILY NOT NAMED // ELL-ASSOCIATED FACTOR EAF Genomic Order:  288
Name:  ? Cre03.g154200 Secondary Identifier:  ? PAC:30787997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g154200 0.5kb upstream 0.5kb upstream 3126 true chromosome_3: 1787956-1791081 Chlamydomonas reinhardtii
Cre03.g154200 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 1790582-1791081 Chlamydomonas reinhardtii
Cre03.g154200 0.5kb downstream 0.5kb downstream 3126 true chromosome_3: 1787456-1790581 Chlamydomonas reinhardtii
Cre03.g154200 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 1787456-1787955 Chlamydomonas reinhardtii
Cre03.g154200 1.0kb upstream 1.0kb upstream 3626 true chromosome_3: 1787956-1791581 Chlamydomonas reinhardtii
Cre03.g154200 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 1790582-1791581 Chlamydomonas reinhardtii
Cre03.g154200 1.0kb downstream 1.0kb downstream 3626 true chromosome_3: 1786956-1790581 Chlamydomonas reinhardtii
Cre03.g154200 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 1786956-1787955 Chlamydomonas reinhardtii
Cre03.g154200 2.0kb upstream 2.0kb upstream 4626 true chromosome_3: 1787956-1792581 Chlamydomonas reinhardtii
Cre03.g154200 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 1790582-1792581 Chlamydomonas reinhardtii
Cre03.g154200 2.0kb downstream 2.0kb downstream 4626 true chromosome_3: 1785956-1790581 Chlamydomonas reinhardtii
Cre03.g154200 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 1785956-1787955 Chlamydomonas reinhardtii
Cre03.g154200 5.0kb upstream 5.0kb upstream 7626 true chromosome_3: 1787956-1795581 Chlamydomonas reinhardtii
Cre03.g154200 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 1790582-1795581 Chlamydomonas reinhardtii
Cre03.g154200 5.0kb downstream 5.0kb downstream 7626 true chromosome_3: 1782956-1790581 Chlamydomonas reinhardtii
Cre03.g154200 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 1782956-1787955 Chlamydomonas reinhardtii
Cre03.g154200 10.0kb upstream 10.0kb upstream 12626 true chromosome_3: 1787956-1800581 Chlamydomonas reinhardtii
Cre03.g154200 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 1790582-1800581 Chlamydomonas reinhardtii
Cre03.g154200 10.0kb downstream 10.0kb downstream 12626 true chromosome_3: 1777956-1790581 Chlamydomonas reinhardtii
Cre03.g154200 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 1777956-1787955 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075997 5260 Chlorophyte View MSA
123428623 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.506        
cufflinks 4.317        
cufflinks 2.494        
cufflinks 2.58        
cufflinks 3.719        
cufflinks 3.223        
cufflinks 3.387        
cufflinks 3.897        
cufflinks 2.746        
cufflinks 2.111        
cufflinks 1.202       Low
cufflinks 3.788        
cufflinks 3.184        
cufflinks 4.167        
cufflinks 2.479        
cufflinks 3.628        
cufflinks 4.262        
cufflinks 2.76        
cufflinks 0.714       Low
cufflinks 4.417        
cufflinks 1.999        
cufflinks 2.446        
cufflinks 4.587       High
cufflinks 3.379        
cufflinks 3.626        
cufflinks 6.55562 1.11397 11.9973   Low
cufflinks 3.87621 0.473445 7.27898    
cufflinks 7.1788 0.0 14.7054   High
cufflinks 3.77366 0.516389 7.03093   Low
cufflinks 6.29862 1.07462 11.5226   High

0 Strain