Gene : Cre02.g142352 C. reinhardtii v5.6
Defline:  (1 of 1) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  1314
Name:  ? Cre02.g142352 Secondary Identifier:  ? PAC:30785235
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii TRNA-CHARGING-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre02.g142352 0.5kb upstream 0.5kb upstream 8901 true chromosome_2: 7799943-7808843 Chlamydomonas reinhardtii
Cre02.g142352 0.5kb upstream 0.5kb upstream 500 false chromosome_2: 7799943-7800442 Chlamydomonas reinhardtii
Cre02.g142352 0.5kb downstream 0.5kb downstream 8901 true chromosome_2: 7800443-7809343 Chlamydomonas reinhardtii
Cre02.g142352 0.5kb downstream 0.5kb downstream 500 false chromosome_2: 7808844-7809343 Chlamydomonas reinhardtii
Cre02.g142352 1.0kb upstream 1.0kb upstream 9401 true chromosome_2: 7799443-7808843 Chlamydomonas reinhardtii
Cre02.g142352 1.0kb upstream 1.0kb upstream 1000 false chromosome_2: 7799443-7800442 Chlamydomonas reinhardtii
Cre02.g142352 1.0kb downstream 1.0kb downstream 9401 true chromosome_2: 7800443-7809843 Chlamydomonas reinhardtii
Cre02.g142352 1.0kb downstream 1.0kb downstream 1000 false chromosome_2: 7808844-7809843 Chlamydomonas reinhardtii
Cre02.g142352 2.0kb upstream 2.0kb upstream 10401 true chromosome_2: 7798443-7808843 Chlamydomonas reinhardtii
Cre02.g142352 2.0kb upstream 2.0kb upstream 2000 false chromosome_2: 7798443-7800442 Chlamydomonas reinhardtii
Cre02.g142352 2.0kb downstream 2.0kb downstream 10401 true chromosome_2: 7800443-7810843 Chlamydomonas reinhardtii
Cre02.g142352 2.0kb downstream 2.0kb downstream 2000 false chromosome_2: 7808844-7810843 Chlamydomonas reinhardtii
Cre02.g142352 5.0kb upstream 5.0kb upstream 13401 true chromosome_2: 7795443-7808843 Chlamydomonas reinhardtii
Cre02.g142352 5.0kb upstream 5.0kb upstream 5000 false chromosome_2: 7795443-7800442 Chlamydomonas reinhardtii
Cre02.g142352 5.0kb downstream 5.0kb downstream 13401 true chromosome_2: 7800443-7813843 Chlamydomonas reinhardtii
Cre02.g142352 5.0kb downstream 5.0kb downstream 5000 false chromosome_2: 7808844-7813843 Chlamydomonas reinhardtii
Cre02.g142352 10.0kb upstream 10.0kb upstream 18401 true chromosome_2: 7790443-7808843 Chlamydomonas reinhardtii
Cre02.g142352 10.0kb upstream 10.0kb upstream 10000 false chromosome_2: 7790443-7800442 Chlamydomonas reinhardtii
Cre02.g142352 10.0kb downstream 10.0kb downstream 18401 true chromosome_2: 7800443-7818843 Chlamydomonas reinhardtii
Cre02.g142352 10.0kb downstream 10.0kb downstream 10000 false chromosome_2: 7808844-7818843 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111567 5260 Chlorophyte View MSA
123427860 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.434        
cufflinks 2.886       High
cufflinks 1.831        
cufflinks 2.12        
cufflinks 2.707        
cufflinks 2.052        
cufflinks 1.761        
cufflinks 1.815        
cufflinks 2.754        
cufflinks 0.489       Low
cufflinks 2.018        
cufflinks 1.846        
cufflinks 0.449       Low
cufflinks 2.336        
cufflinks 1.222        
cufflinks 3.457       High
cufflinks 1.217        
cufflinks 1.994        
cufflinks 0.251       Low
cufflinks 0.521       Low
cufflinks 1.675        
cufflinks 1.358        
cufflinks 0.767        
cufflinks 1.797        
cufflinks 1.437        
cufflinks 13.2082 1.25532 25.1612   Low
cufflinks 23.7981 6.34248 41.2537    
cufflinks 1.73555 0.0 4.06789   Low
cufflinks 9.95183 1.24529 18.6584   Low
cufflinks 22.133 3.6446 40.6214   High

0 Strain