Gene : Cre03.g170150 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR10857//PTHR10857:SF0 - COPINE // PROTEIN GEM-4 Genomic Order:  638
Name:  ? Cre03.g170150 Secondary Identifier:  ? PAC:30786764
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g170150 0.5kb upstream 0.5kb upstream 6924 true chromosome_3: 3777403-3784326 Chlamydomonas reinhardtii
Cre03.g170150 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 3783827-3784326 Chlamydomonas reinhardtii
Cre03.g170150 0.5kb downstream 0.5kb downstream 6924 true chromosome_3: 3776903-3783826 Chlamydomonas reinhardtii
Cre03.g170150 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 3776903-3777402 Chlamydomonas reinhardtii
Cre03.g170150 1.0kb upstream 1.0kb upstream 7424 true chromosome_3: 3777403-3784826 Chlamydomonas reinhardtii
Cre03.g170150 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 3783827-3784826 Chlamydomonas reinhardtii
Cre03.g170150 1.0kb downstream 1.0kb downstream 7424 true chromosome_3: 3776403-3783826 Chlamydomonas reinhardtii
Cre03.g170150 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 3776403-3777402 Chlamydomonas reinhardtii
Cre03.g170150 2.0kb upstream 2.0kb upstream 8424 true chromosome_3: 3777403-3785826 Chlamydomonas reinhardtii
Cre03.g170150 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 3783827-3785826 Chlamydomonas reinhardtii
Cre03.g170150 2.0kb downstream 2.0kb downstream 8424 true chromosome_3: 3775403-3783826 Chlamydomonas reinhardtii
Cre03.g170150 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 3775403-3777402 Chlamydomonas reinhardtii
Cre03.g170150 5.0kb upstream 5.0kb upstream 11424 true chromosome_3: 3777403-3788826 Chlamydomonas reinhardtii
Cre03.g170150 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 3783827-3788826 Chlamydomonas reinhardtii
Cre03.g170150 5.0kb downstream 5.0kb downstream 11424 true chromosome_3: 3772403-3783826 Chlamydomonas reinhardtii
Cre03.g170150 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 3772403-3777402 Chlamydomonas reinhardtii
Cre03.g170150 10.0kb upstream 10.0kb upstream 16424 true chromosome_3: 3777403-3793826 Chlamydomonas reinhardtii
Cre03.g170150 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 3783827-3793826 Chlamydomonas reinhardtii
Cre03.g170150 10.0kb downstream 10.0kb downstream 16424 true chromosome_3: 3767403-3783826 Chlamydomonas reinhardtii
Cre03.g170150 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 3767403-3777402 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098452 5260 Chlorophyte View MSA
123424570 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.58       Low
cufflinks 1.536        
cufflinks 1.267        
cufflinks 1.434        
cufflinks 1.001        
cufflinks 1.269        
cufflinks 1.819        
cufflinks 1.825        
cufflinks 0.988        
cufflinks 0.3       Low
cufflinks 1.21        
cufflinks 2.141       High
cufflinks 0.576       Low
cufflinks 1.259        
cufflinks 1.641        
cufflinks 0.844        
cufflinks 0.745        
cufflinks 1.04        
cufflinks 0.212       Low
cufflinks 1.577        
cufflinks 0.902        
cufflinks 0.874        
cufflinks 3.571       High
cufflinks 1.448        
cufflinks 1.127        
cufflinks 1.1193 0.0363055 2.2023   Low
cufflinks 1.31671 0.0 2.81269   Low
cufflinks 2.30058 0.0 5.03973    
cufflinks 2.07968 0.234579 3.92479    
cufflinks 8.82829 1.7637 15.8929   High

0 Strain