Gene : CPL4 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g176700 Defline:  (1 of 1) K17408 - small subunit ribosomal protein S29 (DAP3, MRPS29)
Genomic Order:  783 Name:  ? Cre03.g176700
Secondary Identifier:  ? PAC:30787082
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g176700 0.5kb upstream 0.5kb upstream 3912 true chromosome_3: 4544240-4548151 Chlamydomonas reinhardtii
Cre03.g176700 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 4544240-4544739 Chlamydomonas reinhardtii
Cre03.g176700 0.5kb downstream 0.5kb downstream 3912 true chromosome_3: 4544740-4548651 Chlamydomonas reinhardtii
Cre03.g176700 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 4548152-4548651 Chlamydomonas reinhardtii
Cre03.g176700 1.0kb upstream 1.0kb upstream 4412 true chromosome_3: 4543740-4548151 Chlamydomonas reinhardtii
Cre03.g176700 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 4543740-4544739 Chlamydomonas reinhardtii
Cre03.g176700 1.0kb downstream 1.0kb downstream 4412 true chromosome_3: 4544740-4549151 Chlamydomonas reinhardtii
Cre03.g176700 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 4548152-4549151 Chlamydomonas reinhardtii
Cre03.g176700 2.0kb upstream 2.0kb upstream 5412 true chromosome_3: 4542740-4548151 Chlamydomonas reinhardtii
Cre03.g176700 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 4542740-4544739 Chlamydomonas reinhardtii
Cre03.g176700 2.0kb downstream 2.0kb downstream 5412 true chromosome_3: 4544740-4550151 Chlamydomonas reinhardtii
Cre03.g176700 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 4548152-4550151 Chlamydomonas reinhardtii
Cre03.g176700 5.0kb upstream 5.0kb upstream 8412 true chromosome_3: 4539740-4548151 Chlamydomonas reinhardtii
Cre03.g176700 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 4539740-4544739 Chlamydomonas reinhardtii
Cre03.g176700 5.0kb downstream 5.0kb downstream 8412 true chromosome_3: 4544740-4553151 Chlamydomonas reinhardtii
Cre03.g176700 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 4548152-4553151 Chlamydomonas reinhardtii
Cre03.g176700 10.0kb upstream 10.0kb upstream 13412 true chromosome_3: 4534740-4548151 Chlamydomonas reinhardtii
Cre03.g176700 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 4534740-4544739 Chlamydomonas reinhardtii
Cre03.g176700 10.0kb downstream 10.0kb downstream 13412 true chromosome_3: 4544740-4558151 Chlamydomonas reinhardtii
Cre03.g176700 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 4548152-4558151 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111211 5260 Chlorophyte View MSA
123424162 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.059       Low
cufflinks 2.398       High
cufflinks 1.281        
cufflinks 1.742        
cufflinks 1.791        
cufflinks 1.48        
cufflinks 1.454        
cufflinks 1.816        
cufflinks 1.356        
cufflinks 0.609       Low
cufflinks 1.64        
cufflinks 1.539        
cufflinks 0.883       Low
cufflinks 2.09        
cufflinks 1.665        
cufflinks 1.531        
cufflinks 2.211       High
cufflinks 1.962        
cufflinks 0.79       Low
cufflinks 2.457       High
cufflinks 1.385        
cufflinks 2.008        
cufflinks 1.408        
cufflinks 1.841        
cufflinks 1.844        
cufflinks 8.58255 1.45119 15.7139    
cufflinks 17.4025 4.73248 30.0725   High
cufflinks 10.4796 0.0 21.3365    
cufflinks 9.2475 1.54688 16.9481    
cufflinks 10.6016 2.08716 19.116    

0 Strain