Gene : ATPVD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g176250 Defline:  (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D)
Genomic Order:  772 Name:  ? Cre03.g176250
Secondary Identifier:  ? PAC:30787498
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g176250 0.5kb upstream 0.5kb upstream 4083 true chromosome_3: 4492040-4496122 Chlamydomonas reinhardtii
Cre03.g176250 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 4492040-4492539 Chlamydomonas reinhardtii
Cre03.g176250 0.5kb downstream 0.5kb downstream 4083 true chromosome_3: 4492540-4496622 Chlamydomonas reinhardtii
Cre03.g176250 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 4496123-4496622 Chlamydomonas reinhardtii
Cre03.g176250 1.0kb upstream 1.0kb upstream 4583 true chromosome_3: 4491540-4496122 Chlamydomonas reinhardtii
Cre03.g176250 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 4491540-4492539 Chlamydomonas reinhardtii
Cre03.g176250 1.0kb downstream 1.0kb downstream 4583 true chromosome_3: 4492540-4497122 Chlamydomonas reinhardtii
Cre03.g176250 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 4496123-4497122 Chlamydomonas reinhardtii
Cre03.g176250 2.0kb upstream 2.0kb upstream 5583 true chromosome_3: 4490540-4496122 Chlamydomonas reinhardtii
Cre03.g176250 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 4490540-4492539 Chlamydomonas reinhardtii
Cre03.g176250 2.0kb downstream 2.0kb downstream 5583 true chromosome_3: 4492540-4498122 Chlamydomonas reinhardtii
Cre03.g176250 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 4496123-4498122 Chlamydomonas reinhardtii
Cre03.g176250 5.0kb upstream 5.0kb upstream 8583 true chromosome_3: 4487540-4496122 Chlamydomonas reinhardtii
Cre03.g176250 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 4487540-4492539 Chlamydomonas reinhardtii
Cre03.g176250 5.0kb downstream 5.0kb downstream 8583 true chromosome_3: 4492540-4501122 Chlamydomonas reinhardtii
Cre03.g176250 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 4496123-4501122 Chlamydomonas reinhardtii
Cre03.g176250 10.0kb upstream 10.0kb upstream 13583 true chromosome_3: 4482540-4496122 Chlamydomonas reinhardtii
Cre03.g176250 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 4482540-4492539 Chlamydomonas reinhardtii
Cre03.g176250 10.0kb downstream 10.0kb downstream 13583 true chromosome_3: 4492540-4506122 Chlamydomonas reinhardtii
Cre03.g176250 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 4496123-4506122 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110382 5260 Chlorophyte View MSA
123427776 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.883     High  
cufflinks 46.564     High  
cufflinks 40.516     High  
cufflinks 41.15     High  
cufflinks 44.219     High  
cufflinks 44.106     High  
cufflinks 34.567     High  
cufflinks 38.45     High  
cufflinks 33.786     High  
cufflinks 19.163     High Low
cufflinks 28.95     High  
cufflinks 38.855     High  
cufflinks 27.692     High  
cufflinks 54.418     High High
cufflinks 29.597     High  
cufflinks 40.463     High  
cufflinks 31.98     High  
cufflinks 44.879     High  
cufflinks 8.247     High Low
cufflinks 49.283     High  
cufflinks 28.949     High  
cufflinks 29.213     High  
cufflinks 59.074     High High
cufflinks 37.153     High  
cufflinks 32.076     High  
cufflinks 130.88 0.0 268.489 High Low
cufflinks 65.1317 14.1187 116.145 High  
cufflinks 50.7521 0.0 104.332 High  
cufflinks 40.7372 0.0 81.5852 High Low
cufflinks 85.5225 4.71882 166.326 High High

0 Strain