Gene : Cre03.g176100 C. reinhardtii v5.6
Defline:  (1 of 1) K18732 - SAP domain-containing ribonucleoprotein (SARNP, CIP29, THO1) Genomic Order:  769
Name:  ? Cre03.g176100 Secondary Identifier:  ? PAC:30787519
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g176100 0.5kb upstream 0.5kb upstream 3478 true chromosome_3: 4481470-4484947 Chlamydomonas reinhardtii
Cre03.g176100 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 4481470-4481969 Chlamydomonas reinhardtii
Cre03.g176100 0.5kb downstream 0.5kb downstream 3478 true chromosome_3: 4481970-4485447 Chlamydomonas reinhardtii
Cre03.g176100 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 4484948-4485447 Chlamydomonas reinhardtii
Cre03.g176100 1.0kb upstream 1.0kb upstream 3978 true chromosome_3: 4480970-4484947 Chlamydomonas reinhardtii
Cre03.g176100 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 4480970-4481969 Chlamydomonas reinhardtii
Cre03.g176100 1.0kb downstream 1.0kb downstream 3978 true chromosome_3: 4481970-4485947 Chlamydomonas reinhardtii
Cre03.g176100 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 4484948-4485947 Chlamydomonas reinhardtii
Cre03.g176100 2.0kb upstream 2.0kb upstream 4978 true chromosome_3: 4479970-4484947 Chlamydomonas reinhardtii
Cre03.g176100 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 4479970-4481969 Chlamydomonas reinhardtii
Cre03.g176100 2.0kb downstream 2.0kb downstream 4978 true chromosome_3: 4481970-4486947 Chlamydomonas reinhardtii
Cre03.g176100 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 4484948-4486947 Chlamydomonas reinhardtii
Cre03.g176100 5.0kb upstream 5.0kb upstream 7978 true chromosome_3: 4476970-4484947 Chlamydomonas reinhardtii
Cre03.g176100 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 4476970-4481969 Chlamydomonas reinhardtii
Cre03.g176100 5.0kb downstream 5.0kb downstream 7978 true chromosome_3: 4481970-4489947 Chlamydomonas reinhardtii
Cre03.g176100 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 4484948-4489947 Chlamydomonas reinhardtii
Cre03.g176100 10.0kb upstream 10.0kb upstream 12978 true chromosome_3: 4471970-4484947 Chlamydomonas reinhardtii
Cre03.g176100 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 4471970-4481969 Chlamydomonas reinhardtii
Cre03.g176100 10.0kb downstream 10.0kb downstream 12978 true chromosome_3: 4481970-4494947 Chlamydomonas reinhardtii
Cre03.g176100 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 4484948-4494947 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111891 5260 Chlorophyte View MSA
123428142 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.732     High  
cufflinks 32.411     High  
cufflinks 40.027     High High
cufflinks 29.532     High  
cufflinks 27.753     High  
cufflinks 27.038     High  
cufflinks 33.589     High  
cufflinks 32.391     High  
cufflinks 16.324     High  
cufflinks 23.676     High  
cufflinks 23.498     High  
cufflinks 24.126     High  
cufflinks 32.141     High  
cufflinks 28.953     High  
cufflinks 22.13     High  
cufflinks 15.418     High  
cufflinks 9.077       Low
cufflinks 30.595     High  
cufflinks 25.438     High  
cufflinks 22.622     High  
cufflinks 20.311     High  
cufflinks 8.475       Low
cufflinks 30.794     High  
cufflinks 23.137     High  
cufflinks 9.007       Low
cufflinks 26.5141 1.5825 51.4457 High Low
cufflinks 28.9068 7.75067 50.0629 High  
cufflinks 32.7059 0.0 66.3296 High  
cufflinks 23.35 1.72202 44.9781 High Low
cufflinks 46.016 6.07278 85.9592 High  

0 Strain