Gene : Cre03.g183500 C. reinhardtii v5.6
Defline:  (1 of 1) K14851 - ribosomal RNA-processing protein 17 (RRP17, NOL12) Genomic Order:  931
Name:  ? Cre03.g183500 Secondary Identifier:  ? PAC:30788220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g183500 0.5kb upstream 0.5kb upstream 2226 true chromosome_3: 5280973-5283198 Chlamydomonas reinhardtii
Cre03.g183500 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5282699-5283198 Chlamydomonas reinhardtii
Cre03.g183500 0.5kb downstream 0.5kb downstream 2226 true chromosome_3: 5280473-5282698 Chlamydomonas reinhardtii
Cre03.g183500 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5280473-5280972 Chlamydomonas reinhardtii
Cre03.g183500 1.0kb upstream 1.0kb upstream 2726 true chromosome_3: 5280973-5283698 Chlamydomonas reinhardtii
Cre03.g183500 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5282699-5283698 Chlamydomonas reinhardtii
Cre03.g183500 1.0kb downstream 1.0kb downstream 2726 true chromosome_3: 5279973-5282698 Chlamydomonas reinhardtii
Cre03.g183500 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5279973-5280972 Chlamydomonas reinhardtii
Cre03.g183500 2.0kb upstream 2.0kb upstream 3726 true chromosome_3: 5280973-5284698 Chlamydomonas reinhardtii
Cre03.g183500 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5282699-5284698 Chlamydomonas reinhardtii
Cre03.g183500 2.0kb downstream 2.0kb downstream 3726 true chromosome_3: 5278973-5282698 Chlamydomonas reinhardtii
Cre03.g183500 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5278973-5280972 Chlamydomonas reinhardtii
Cre03.g183500 5.0kb upstream 5.0kb upstream 6726 true chromosome_3: 5280973-5287698 Chlamydomonas reinhardtii
Cre03.g183500 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5282699-5287698 Chlamydomonas reinhardtii
Cre03.g183500 5.0kb downstream 5.0kb downstream 6726 true chromosome_3: 5275973-5282698 Chlamydomonas reinhardtii
Cre03.g183500 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5275973-5280972 Chlamydomonas reinhardtii
Cre03.g183500 10.0kb upstream 10.0kb upstream 11726 true chromosome_3: 5280973-5292698 Chlamydomonas reinhardtii
Cre03.g183500 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5282699-5292698 Chlamydomonas reinhardtii
Cre03.g183500 10.0kb downstream 10.0kb downstream 11726 true chromosome_3: 5270973-5282698 Chlamydomonas reinhardtii
Cre03.g183500 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5270973-5280972 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093781 5260 Chlorophyte View MSA
123426889 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.811        
cufflinks 8.778        
cufflinks 4.459        
cufflinks 7.392        
cufflinks 6.553        
cufflinks 6.716        
cufflinks 9.52       High
cufflinks 8.106        
cufflinks 3.915        
cufflinks 1.271       Low
cufflinks 7.789        
cufflinks 9.123        
cufflinks 2.136       Low
cufflinks 6.141        
cufflinks 6.875        
cufflinks 7.203        
cufflinks 2.805       Low
cufflinks 4.629        
cufflinks 2.85       Low
cufflinks 11.073       High
cufflinks 6.982        
cufflinks 3.664        
cufflinks 8.912        
cufflinks 8.217        
cufflinks 3.197        
cufflinks 8.78304 1.42623 16.1399    
cufflinks 9.22509 1.57769 16.8725    
cufflinks 5.60099 0.0 12.3432    
cufflinks 7.56436 1.16263 13.9661    
cufflinks 18.0032 3.59591 32.4106   High

0 Strain