Gene : Cre03.g155527 C. reinhardtii v5.6
Defline:  (1 of 12) PF04749 - PLAC8 family (PLAC8) Genomic Order:  318
Name:  ? Cre03.g155527 Secondary Identifier:  ? PAC:30787947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g155527 0.5kb upstream 0.5kb upstream 2436 true chromosome_3: 1943945-1946380 Chlamydomonas reinhardtii
Cre03.g155527 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 1945881-1946380 Chlamydomonas reinhardtii
Cre03.g155527 0.5kb downstream 0.5kb downstream 2436 true chromosome_3: 1943445-1945880 Chlamydomonas reinhardtii
Cre03.g155527 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 1943445-1943944 Chlamydomonas reinhardtii
Cre03.g155527 1.0kb upstream 1.0kb upstream 2936 true chromosome_3: 1943945-1946880 Chlamydomonas reinhardtii
Cre03.g155527 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 1945881-1946880 Chlamydomonas reinhardtii
Cre03.g155527 1.0kb downstream 1.0kb downstream 2936 true chromosome_3: 1942945-1945880 Chlamydomonas reinhardtii
Cre03.g155527 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 1942945-1943944 Chlamydomonas reinhardtii
Cre03.g155527 2.0kb upstream 2.0kb upstream 3936 true chromosome_3: 1943945-1947880 Chlamydomonas reinhardtii
Cre03.g155527 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 1945881-1947880 Chlamydomonas reinhardtii
Cre03.g155527 2.0kb downstream 2.0kb downstream 3936 true chromosome_3: 1941945-1945880 Chlamydomonas reinhardtii
Cre03.g155527 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 1941945-1943944 Chlamydomonas reinhardtii
Cre03.g155527 5.0kb upstream 5.0kb upstream 6936 true chromosome_3: 1943945-1950880 Chlamydomonas reinhardtii
Cre03.g155527 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 1945881-1950880 Chlamydomonas reinhardtii
Cre03.g155527 5.0kb downstream 5.0kb downstream 6936 true chromosome_3: 1938945-1945880 Chlamydomonas reinhardtii
Cre03.g155527 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 1938945-1943944 Chlamydomonas reinhardtii
Cre03.g155527 10.0kb upstream 10.0kb upstream 11936 true chromosome_3: 1943945-1955880 Chlamydomonas reinhardtii
Cre03.g155527 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 1945881-1955880 Chlamydomonas reinhardtii
Cre03.g155527 10.0kb downstream 10.0kb downstream 11936 true chromosome_3: 1933945-1945880 Chlamydomonas reinhardtii
Cre03.g155527 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 1933945-1943944 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080141 5260 Chlorophyte Singleton cluster - no MSA
123429155 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.626       Low
cufflinks 1.819        
cufflinks 1.893        
cufflinks 3.169       High
cufflinks 1.22        
cufflinks 1.485        
cufflinks 1.564        
cufflinks 3.359       High
cufflinks 0.377       Low
cufflinks 0.461       Low
cufflinks 1.825        
cufflinks 2.322        
cufflinks 1.796        
cufflinks 1.415        
cufflinks 2.431        
cufflinks 0.805       Low
cufflinks 1.947        
cufflinks 1.495        
cufflinks 0.805       Low
cufflinks 1.95        
cufflinks 1.442        
cufflinks 1.603        
cufflinks 3.478       High
cufflinks 2.829       High
cufflinks 1.73        
cufflinks 0.848826 0.0 1.81514    
cufflinks 0.843794 0.0 2.18701    
cufflinks 2.7305 0.0 6.62369   High
cufflinks 0.858851 0.0 1.834    
cufflinks 2.78516 0.0 5.64891   High

0 Strain