Gene : SECY2 C. reinhardtii v5.6

Primary Identifier:  ? Cre03.g158250 Defline:  (1 of 1) PTHR10906//PTHR10906:SF2 - SECY/SEC61-ALPHA FAMILY MEMBER // PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC
Genomic Order:  382 Name:  ? Cre03.g158250
Secondary Identifier:  ? PAC:30787361

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g158250 0.5kb upstream 0.5kb upstream 6768 true chromosome_3: 2300200-2306967 Chlamydomonas reinhardtii
Cre03.g158250 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 2300200-2300699 Chlamydomonas reinhardtii
Cre03.g158250 0.5kb downstream 0.5kb downstream 6768 true chromosome_3: 2300700-2307467 Chlamydomonas reinhardtii
Cre03.g158250 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 2306968-2307467 Chlamydomonas reinhardtii
Cre03.g158250 1.0kb upstream 1.0kb upstream 7268 true chromosome_3: 2299700-2306967 Chlamydomonas reinhardtii
Cre03.g158250 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 2299700-2300699 Chlamydomonas reinhardtii
Cre03.g158250 1.0kb downstream 1.0kb downstream 7268 true chromosome_3: 2300700-2307967 Chlamydomonas reinhardtii
Cre03.g158250 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 2306968-2307967 Chlamydomonas reinhardtii
Cre03.g158250 2.0kb upstream 2.0kb upstream 8268 true chromosome_3: 2298700-2306967 Chlamydomonas reinhardtii
Cre03.g158250 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 2298700-2300699 Chlamydomonas reinhardtii
Cre03.g158250 2.0kb downstream 2.0kb downstream 8268 true chromosome_3: 2300700-2308967 Chlamydomonas reinhardtii
Cre03.g158250 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 2306968-2308967 Chlamydomonas reinhardtii
Cre03.g158250 5.0kb upstream 5.0kb upstream 11268 true chromosome_3: 2295700-2306967 Chlamydomonas reinhardtii
Cre03.g158250 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 2295700-2300699 Chlamydomonas reinhardtii
Cre03.g158250 5.0kb downstream 5.0kb downstream 11268 true chromosome_3: 2300700-2311967 Chlamydomonas reinhardtii
Cre03.g158250 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 2306968-2311967 Chlamydomonas reinhardtii
Cre03.g158250 10.0kb upstream 10.0kb upstream 16268 true chromosome_3: 2290700-2306967 Chlamydomonas reinhardtii
Cre03.g158250 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 2290700-2300699 Chlamydomonas reinhardtii
Cre03.g158250 10.0kb downstream 10.0kb downstream 16268 true chromosome_3: 2300700-2316967 Chlamydomonas reinhardtii
Cre03.g158250 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 2306968-2316967 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113067 5260 Chlorophyte View MSA
123425781 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.242        
cufflinks 2.019        
cufflinks 1.389        
cufflinks 1.716        
cufflinks 1.697        
cufflinks 1.672        
cufflinks 1.514        
cufflinks 1.929        
cufflinks 1.74        
cufflinks 0.72       Low
cufflinks 1.538        
cufflinks 1.764        
cufflinks 1.143        
cufflinks 1.864        
cufflinks 1.417        
cufflinks 2.173       High
cufflinks 1.413        
cufflinks 1.593        
cufflinks 0.578       Low
cufflinks 2.161       High
cufflinks 1.66        
cufflinks 1.163        
cufflinks 1.251        
cufflinks 2.168       High
cufflinks 1.348        
cufflinks 8.59621 1.32781 15.8646   High
cufflinks 10.4055 2.71002 18.1011   High
cufflinks 2.13368 0.0 4.92332   Low
cufflinks 3.65994 0.521181 6.79869   Low
cufflinks 4.80808 0.751717 8.86445    

0 Strain