Gene : COX5C C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g157700 Defline:  Mitochondrial cytochrome c oxidase 11 kD subunit
Genomic Order:  370 Name:  ? Cre03.g157700
Secondary Identifier:  ? PAC:30788212
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g157700 0.5kb upstream 0.5kb upstream 1976 true chromosome_3: 2238614-2240589 Chlamydomonas reinhardtii
Cre03.g157700 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 2240090-2240589 Chlamydomonas reinhardtii
Cre03.g157700 0.5kb downstream 0.5kb downstream 1976 true chromosome_3: 2238114-2240089 Chlamydomonas reinhardtii
Cre03.g157700 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 2238114-2238613 Chlamydomonas reinhardtii
Cre03.g157700 1.0kb upstream 1.0kb upstream 2476 true chromosome_3: 2238614-2241089 Chlamydomonas reinhardtii
Cre03.g157700 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 2240090-2241089 Chlamydomonas reinhardtii
Cre03.g157700 1.0kb downstream 1.0kb downstream 2476 true chromosome_3: 2237614-2240089 Chlamydomonas reinhardtii
Cre03.g157700 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 2237614-2238613 Chlamydomonas reinhardtii
Cre03.g157700 2.0kb upstream 2.0kb upstream 3476 true chromosome_3: 2238614-2242089 Chlamydomonas reinhardtii
Cre03.g157700 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 2240090-2242089 Chlamydomonas reinhardtii
Cre03.g157700 2.0kb downstream 2.0kb downstream 3476 true chromosome_3: 2236614-2240089 Chlamydomonas reinhardtii
Cre03.g157700 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 2236614-2238613 Chlamydomonas reinhardtii
Cre03.g157700 5.0kb upstream 5.0kb upstream 6476 true chromosome_3: 2238614-2245089 Chlamydomonas reinhardtii
Cre03.g157700 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 2240090-2245089 Chlamydomonas reinhardtii
Cre03.g157700 5.0kb downstream 5.0kb downstream 6476 true chromosome_3: 2233614-2240089 Chlamydomonas reinhardtii
Cre03.g157700 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 2233614-2238613 Chlamydomonas reinhardtii
Cre03.g157700 10.0kb upstream 10.0kb upstream 11476 true chromosome_3: 2238614-2250089 Chlamydomonas reinhardtii
Cre03.g157700 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 2240090-2250089 Chlamydomonas reinhardtii
Cre03.g157700 10.0kb downstream 10.0kb downstream 11476 true chromosome_3: 2228614-2240089 Chlamydomonas reinhardtii
Cre03.g157700 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 2228614-2238613 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124093335 5260 Chlorophyte View MSA
123410513 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.641     High  
cufflinks 293.519     High  
cufflinks 318.805     High  
cufflinks 172.879     High  
cufflinks 312.046     High  
cufflinks 350.436     High High
cufflinks 374.968     High High
cufflinks 201.934     High  
cufflinks 101.091     High Low
cufflinks 325.501     High High
cufflinks 141.337     High  
cufflinks 173.255     High  
cufflinks 368.685     High High
cufflinks 309.287     High  
cufflinks 196.958     High  
cufflinks 110.495     High  
cufflinks 62.383     High Low
cufflinks 279.46     High  
cufflinks 166.309     High  
cufflinks 130.042     High  
cufflinks 217.342     High  
cufflinks 58.014     High Low
cufflinks 232.63     High  
cufflinks 139.641     High  
cufflinks 59.146     High Low
cufflinks 253.146 0.0 519.358 High  
cufflinks 173.953 32.0263 315.88 High  
cufflinks 253.439 0.0 532.076 High  
cufflinks 200.91 0.0 412.136 High Low
cufflinks 184.239 9.22442 359.254 High  

0 Strain