Gene : PFH12 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g160200 Defline:  (1 of 5) PTHR10869//PTHR10869:SF55 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // OXOGLUTARATE/IRON-DEPENDENT OXYGENASE
Genomic Order:  423 Name:  ? Cre03.g160200
Secondary Identifier:  ? PAC:30787477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g160200 0.5kb upstream 0.5kb upstream 3144 true chromosome_3: 2541192-2544335 Chlamydomonas reinhardtii
Cre03.g160200 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 2543836-2544335 Chlamydomonas reinhardtii
Cre03.g160200 0.5kb downstream 0.5kb downstream 3144 true chromosome_3: 2540692-2543835 Chlamydomonas reinhardtii
Cre03.g160200 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 2540692-2541191 Chlamydomonas reinhardtii
Cre03.g160200 1.0kb upstream 1.0kb upstream 3644 true chromosome_3: 2541192-2544835 Chlamydomonas reinhardtii
Cre03.g160200 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 2543836-2544835 Chlamydomonas reinhardtii
Cre03.g160200 1.0kb downstream 1.0kb downstream 3644 true chromosome_3: 2540192-2543835 Chlamydomonas reinhardtii
Cre03.g160200 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 2540192-2541191 Chlamydomonas reinhardtii
Cre03.g160200 2.0kb upstream 2.0kb upstream 4644 true chromosome_3: 2541192-2545835 Chlamydomonas reinhardtii
Cre03.g160200 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 2543836-2545835 Chlamydomonas reinhardtii
Cre03.g160200 2.0kb downstream 2.0kb downstream 4644 true chromosome_3: 2539192-2543835 Chlamydomonas reinhardtii
Cre03.g160200 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 2539192-2541191 Chlamydomonas reinhardtii
Cre03.g160200 5.0kb upstream 5.0kb upstream 7644 true chromosome_3: 2541192-2548835 Chlamydomonas reinhardtii
Cre03.g160200 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 2543836-2548835 Chlamydomonas reinhardtii
Cre03.g160200 5.0kb downstream 5.0kb downstream 7644 true chromosome_3: 2536192-2543835 Chlamydomonas reinhardtii
Cre03.g160200 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 2536192-2541191 Chlamydomonas reinhardtii
Cre03.g160200 10.0kb upstream 10.0kb upstream 12644 true chromosome_3: 2541192-2553835 Chlamydomonas reinhardtii
Cre03.g160200 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 2543836-2553835 Chlamydomonas reinhardtii
Cre03.g160200 10.0kb downstream 10.0kb downstream 12644 true chromosome_3: 2531192-2543835 Chlamydomonas reinhardtii
Cre03.g160200 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 2531192-2541191 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113514 5260 Chlorophyte View MSA
123428732 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.148     High Low
cufflinks 17.455     High  
cufflinks 26.694     High  
cufflinks 24.202     High  
cufflinks 17.711     High  
cufflinks 20.948     High  
cufflinks 22.406     High  
cufflinks 21.944     High  
cufflinks 10.814     High Low
cufflinks 16.19     High  
cufflinks 23.932     High  
cufflinks 26.053     High  
cufflinks 27.426     High  
cufflinks 25.98     High  
cufflinks 19.485     High  
cufflinks 14.448     High  
cufflinks 13.786     High  
cufflinks 20.929     High  
cufflinks 13.906     High  
cufflinks 39.952     High High
cufflinks 16.852     High  
cufflinks 11.607     High Low
cufflinks 48.212     High High
cufflinks 24.2     High  
cufflinks 11.078       Low
cufflinks 57.7351 0.0 135.901 High High
cufflinks 23.3436 4.46981 42.2173    
cufflinks 40.7465 0.0 87.9299 High Low
cufflinks 28.8585 0.0 59.2644 High  
cufflinks 38.6721 0.827309 76.5169 High  

0 Strain