Gene : SAC1 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g160400 Defline:  (1 of 1) PF02080//PF03600 - TrkA-C domain (TrkA_C) // Citrate transporter (CitMHS)
Genomic Order:  427 Name:  ? Cre03.g160400
Secondary Identifier:  ? PAC:30786723
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g160400 0.5kb upstream 0.5kb upstream 7362 true chromosome_3: 2567238-2574599 Chlamydomonas reinhardtii
Cre03.g160400 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 2567238-2567737 Chlamydomonas reinhardtii
Cre03.g160400 0.5kb downstream 0.5kb downstream 7362 true chromosome_3: 2567738-2575099 Chlamydomonas reinhardtii
Cre03.g160400 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 2574600-2575099 Chlamydomonas reinhardtii
Cre03.g160400 1.0kb upstream 1.0kb upstream 7862 true chromosome_3: 2566738-2574599 Chlamydomonas reinhardtii
Cre03.g160400 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 2566738-2567737 Chlamydomonas reinhardtii
Cre03.g160400 1.0kb downstream 1.0kb downstream 7862 true chromosome_3: 2567738-2575599 Chlamydomonas reinhardtii
Cre03.g160400 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 2574600-2575599 Chlamydomonas reinhardtii
Cre03.g160400 2.0kb upstream 2.0kb upstream 8862 true chromosome_3: 2565738-2574599 Chlamydomonas reinhardtii
Cre03.g160400 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 2565738-2567737 Chlamydomonas reinhardtii
Cre03.g160400 2.0kb downstream 2.0kb downstream 8862 true chromosome_3: 2567738-2576599 Chlamydomonas reinhardtii
Cre03.g160400 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 2574600-2576599 Chlamydomonas reinhardtii
Cre03.g160400 5.0kb upstream 5.0kb upstream 11862 true chromosome_3: 2562738-2574599 Chlamydomonas reinhardtii
Cre03.g160400 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 2562738-2567737 Chlamydomonas reinhardtii
Cre03.g160400 5.0kb downstream 5.0kb downstream 11862 true chromosome_3: 2567738-2579599 Chlamydomonas reinhardtii
Cre03.g160400 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 2574600-2579599 Chlamydomonas reinhardtii
Cre03.g160400 10.0kb upstream 10.0kb upstream 16862 true chromosome_3: 2557738-2574599 Chlamydomonas reinhardtii
Cre03.g160400 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 2557738-2567737 Chlamydomonas reinhardtii
Cre03.g160400 10.0kb downstream 10.0kb downstream 16862 true chromosome_3: 2567738-2584599 Chlamydomonas reinhardtii
Cre03.g160400 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 2574600-2584599 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113301 5260 Chlorophyte View MSA
123427329 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.193        
cufflinks 5.921        
cufflinks 16.949     High High
cufflinks 21.394     High High
cufflinks 4.821        
cufflinks 5.595        
cufflinks 6.134        
cufflinks 14.139       High
cufflinks 4.645        
cufflinks 1.748       Low
cufflinks 35.524     High High
cufflinks 8.376        
cufflinks 4.459        
cufflinks 3.492        
cufflinks 10.349        
cufflinks 2.087       Low
cufflinks 2.83       Low
cufflinks 10.478        
cufflinks 2.224       Low
cufflinks 4.807        
cufflinks 12.46        
cufflinks 6.076        
cufflinks 4.559        
cufflinks 19.732     High High
cufflinks 6.827        
cufflinks 5.96805 0.877948 11.0582   High
cufflinks 15.1593 4.01746 26.3012    
cufflinks 12.5343 0.0 25.2565    
cufflinks 10.131 0.961514 19.3005   High
cufflinks 19.162 2.7228 35.6012    

0 Strain