Gene : LSM7 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g164101 Defline:  (1 of 1) K12626 - U6 snRNA-associated Sm-like protein LSm7 (LSM7)
Genomic Order:  505 Name:  ? Cre03.g164101
Secondary Identifier:  ? PAC:30786797
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g164101 0.5kb upstream 0.5kb upstream 2596 true chromosome_3: 3034460-3037055 Chlamydomonas reinhardtii
Cre03.g164101 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 3036556-3037055 Chlamydomonas reinhardtii
Cre03.g164101 0.5kb downstream 0.5kb downstream 2596 true chromosome_3: 3033960-3036555 Chlamydomonas reinhardtii
Cre03.g164101 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 3033960-3034459 Chlamydomonas reinhardtii
Cre03.g164101 1.0kb upstream 1.0kb upstream 3096 true chromosome_3: 3034460-3037555 Chlamydomonas reinhardtii
Cre03.g164101 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 3036556-3037555 Chlamydomonas reinhardtii
Cre03.g164101 1.0kb downstream 1.0kb downstream 3096 true chromosome_3: 3033460-3036555 Chlamydomonas reinhardtii
Cre03.g164101 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 3033460-3034459 Chlamydomonas reinhardtii
Cre03.g164101 2.0kb upstream 2.0kb upstream 4096 true chromosome_3: 3034460-3038555 Chlamydomonas reinhardtii
Cre03.g164101 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 3036556-3038555 Chlamydomonas reinhardtii
Cre03.g164101 2.0kb downstream 2.0kb downstream 4096 true chromosome_3: 3032460-3036555 Chlamydomonas reinhardtii
Cre03.g164101 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 3032460-3034459 Chlamydomonas reinhardtii
Cre03.g164101 5.0kb upstream 5.0kb upstream 7096 true chromosome_3: 3034460-3041555 Chlamydomonas reinhardtii
Cre03.g164101 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 3036556-3041555 Chlamydomonas reinhardtii
Cre03.g164101 5.0kb downstream 5.0kb downstream 7096 true chromosome_3: 3029460-3036555 Chlamydomonas reinhardtii
Cre03.g164101 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 3029460-3034459 Chlamydomonas reinhardtii
Cre03.g164101 10.0kb upstream 10.0kb upstream 12096 true chromosome_3: 3034460-3046555 Chlamydomonas reinhardtii
Cre03.g164101 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 3036556-3046555 Chlamydomonas reinhardtii
Cre03.g164101 10.0kb downstream 10.0kb downstream 12096 true chromosome_3: 3024460-3036555 Chlamydomonas reinhardtii
Cre03.g164101 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 3024460-3034459 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109734 5260 Chlorophyte View MSA
123423999 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.652     High  
cufflinks 25.986     High High
cufflinks 22.406     High  
cufflinks 16.904     High  
cufflinks 25.012     High High
cufflinks 21.858     High  
cufflinks 26.942     High High
cufflinks 22.582     High  
cufflinks 19.391     High  
cufflinks 14.906     High  
cufflinks 11.579       Low
cufflinks 17.996     High  
cufflinks 17.645     High  
cufflinks 21.765     High  
cufflinks 12.546        
cufflinks 18.116     High  
cufflinks 7.539       Low
cufflinks 20.545     High  
cufflinks 11.712     High  
cufflinks 18.761     High  
cufflinks 14.858     High  
cufflinks 8.936       Low
cufflinks 21.744     High  
cufflinks 15.202        
cufflinks 8.122       Low
cufflinks 13.0883 0.0 26.9052   Low
cufflinks 15.8475 2.58788 29.1072    
cufflinks 20.5599 0.0 45.6437    
cufflinks 17.0231 0.0 37.2449    
cufflinks 31.4346 0.0 63.1388 High High

0 Strain