Gene : Cre03.g202500 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  1384
Name:  ? Cre03.g202500 Secondary Identifier:  ? PAC:30787674
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g202500 0.5kb upstream 0.5kb upstream 4372 true chromosome_3: 7881500-7885871 Chlamydomonas reinhardtii
Cre03.g202500 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 7881500-7881999 Chlamydomonas reinhardtii
Cre03.g202500 0.5kb downstream 0.5kb downstream 4372 true chromosome_3: 7882000-7886371 Chlamydomonas reinhardtii
Cre03.g202500 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 7885872-7886371 Chlamydomonas reinhardtii
Cre03.g202500 1.0kb upstream 1.0kb upstream 4872 true chromosome_3: 7881000-7885871 Chlamydomonas reinhardtii
Cre03.g202500 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 7881000-7881999 Chlamydomonas reinhardtii
Cre03.g202500 1.0kb downstream 1.0kb downstream 4872 true chromosome_3: 7882000-7886871 Chlamydomonas reinhardtii
Cre03.g202500 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 7885872-7886871 Chlamydomonas reinhardtii
Cre03.g202500 2.0kb upstream 2.0kb upstream 5872 true chromosome_3: 7880000-7885871 Chlamydomonas reinhardtii
Cre03.g202500 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 7880000-7881999 Chlamydomonas reinhardtii
Cre03.g202500 2.0kb downstream 2.0kb downstream 5872 true chromosome_3: 7882000-7887871 Chlamydomonas reinhardtii
Cre03.g202500 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 7885872-7887871 Chlamydomonas reinhardtii
Cre03.g202500 5.0kb upstream 5.0kb upstream 8872 true chromosome_3: 7877000-7885871 Chlamydomonas reinhardtii
Cre03.g202500 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 7877000-7881999 Chlamydomonas reinhardtii
Cre03.g202500 5.0kb downstream 5.0kb downstream 8872 true chromosome_3: 7882000-7890871 Chlamydomonas reinhardtii
Cre03.g202500 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 7885872-7890871 Chlamydomonas reinhardtii
Cre03.g202500 10.0kb upstream 10.0kb upstream 13872 true chromosome_3: 7872000-7885871 Chlamydomonas reinhardtii
Cre03.g202500 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 7872000-7881999 Chlamydomonas reinhardtii
Cre03.g202500 10.0kb downstream 10.0kb downstream 13872 true chromosome_3: 7882000-7895871 Chlamydomonas reinhardtii
Cre03.g202500 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 7885872-7895871 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098138 5260 Chlorophyte View MSA
123428444 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.825       Low
cufflinks 7.443        
cufflinks 19.891     High High
cufflinks 21.468     High High
cufflinks 6.685        
cufflinks 6.027        
cufflinks 9.036        
cufflinks 14.451        
cufflinks 2.848       Low
cufflinks 3.528       Low
cufflinks 28.211     High High
cufflinks 11.803        
cufflinks 6.496        
cufflinks 6.8        
cufflinks 14.038     High  
cufflinks 3.006       Low
cufflinks 11.273        
cufflinks 13.263        
cufflinks 4.981        
cufflinks 20.233     High High
cufflinks 13.73     High  
cufflinks 7.302        
cufflinks 6.928        
cufflinks 18.762     High High
cufflinks 6.502        
cufflinks 9.62673 1.16178 18.0917 High High
cufflinks 9.25122 2.48048 16.022   Low
cufflinks 9.68126 0.0 19.4568    
cufflinks 21.9439 0.821827 43.066   High
cufflinks 7.63549 1.53126 13.7397   Low

0 Strain