Gene : Cre03.g202113 C. reinhardtii v5.6
Defline:  (1 of 1) 6.3.2.6 - Phosphoribosylaminoimidazolesuccinocarboxamide synthase / SAICARs Genomic Order:  1498
Name:  ? Cre03.g202113 Secondary Identifier:  ? PAC:30786901
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii PWY-6124 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-841 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g202113 0.5kb upstream 0.5kb upstream 4967 true chromosome_3: 8559294-8564260 Chlamydomonas reinhardtii
Cre03.g202113 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 8559294-8559793 Chlamydomonas reinhardtii
Cre03.g202113 0.5kb downstream 0.5kb downstream 4967 true chromosome_3: 8559794-8564760 Chlamydomonas reinhardtii
Cre03.g202113 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 8564261-8564760 Chlamydomonas reinhardtii
Cre03.g202113 1.0kb upstream 1.0kb upstream 5467 true chromosome_3: 8558794-8564260 Chlamydomonas reinhardtii
Cre03.g202113 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 8558794-8559793 Chlamydomonas reinhardtii
Cre03.g202113 1.0kb downstream 1.0kb downstream 5467 true chromosome_3: 8559794-8565260 Chlamydomonas reinhardtii
Cre03.g202113 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 8564261-8565260 Chlamydomonas reinhardtii
Cre03.g202113 2.0kb upstream 2.0kb upstream 6467 true chromosome_3: 8557794-8564260 Chlamydomonas reinhardtii
Cre03.g202113 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 8557794-8559793 Chlamydomonas reinhardtii
Cre03.g202113 2.0kb downstream 2.0kb downstream 6467 true chromosome_3: 8559794-8566260 Chlamydomonas reinhardtii
Cre03.g202113 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 8564261-8566260 Chlamydomonas reinhardtii
Cre03.g202113 5.0kb upstream 5.0kb upstream 9467 true chromosome_3: 8554794-8564260 Chlamydomonas reinhardtii
Cre03.g202113 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 8554794-8559793 Chlamydomonas reinhardtii
Cre03.g202113 5.0kb downstream 5.0kb downstream 9467 true chromosome_3: 8559794-8569260 Chlamydomonas reinhardtii
Cre03.g202113 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 8564261-8569260 Chlamydomonas reinhardtii
Cre03.g202113 10.0kb upstream 10.0kb upstream 14467 true chromosome_3: 8549794-8564260 Chlamydomonas reinhardtii
Cre03.g202113 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 8549794-8559793 Chlamydomonas reinhardtii
Cre03.g202113 10.0kb downstream 10.0kb downstream 14467 true chromosome_3: 8559794-8574260 Chlamydomonas reinhardtii
Cre03.g202113 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 8564261-8574260 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109662 5260 Chlorophyte View MSA
123424061 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.419     High  
cufflinks 11.954       High
cufflinks 8.791        
cufflinks 7.712        
cufflinks 20.365     High High
cufflinks 9.804        
cufflinks 9.38        
cufflinks 10.934        
cufflinks 10.971     High  
cufflinks 4.57       Low
cufflinks 7.123        
cufflinks 6.566        
cufflinks 6.282        
cufflinks 9.858        
cufflinks 7.169        
cufflinks 16.147     High High
cufflinks 5.518        
cufflinks 8.31        
cufflinks 3.426       Low
cufflinks 6.277        
cufflinks 8.466        
cufflinks 5.338        
cufflinks 4.964       Low
cufflinks 8.096        
cufflinks 4.894       Low
cufflinks 19.9872 1.63004 38.3444   Low
cufflinks 37.5596 9.46027 65.6589 High  
cufflinks 19.032 0.0 38.291    
cufflinks 15.864 1.62763 30.1005   Low
cufflinks 23.1688 3.82949 42.5081   High

0 Strain