Gene : Cre03.g205600 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR21043:SF1 - PROTEIN IOJAP, CHLOROPLASTIC Genomic Order:  1315
Name:  ? Cre03.g205600 Secondary Identifier:  ? PAC:30786602
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g205600 0.5kb upstream 0.5kb upstream 3892 true chromosome_3: 7478070-7481961 Chlamydomonas reinhardtii
Cre03.g205600 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 7478070-7478569 Chlamydomonas reinhardtii
Cre03.g205600 0.5kb downstream 0.5kb downstream 3892 true chromosome_3: 7478570-7482461 Chlamydomonas reinhardtii
Cre03.g205600 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 7481962-7482461 Chlamydomonas reinhardtii
Cre03.g205600 1.0kb upstream 1.0kb upstream 4392 true chromosome_3: 7477570-7481961 Chlamydomonas reinhardtii
Cre03.g205600 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 7477570-7478569 Chlamydomonas reinhardtii
Cre03.g205600 1.0kb downstream 1.0kb downstream 4392 true chromosome_3: 7478570-7482961 Chlamydomonas reinhardtii
Cre03.g205600 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 7481962-7482961 Chlamydomonas reinhardtii
Cre03.g205600 2.0kb upstream 2.0kb upstream 5392 true chromosome_3: 7476570-7481961 Chlamydomonas reinhardtii
Cre03.g205600 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 7476570-7478569 Chlamydomonas reinhardtii
Cre03.g205600 2.0kb downstream 2.0kb downstream 5392 true chromosome_3: 7478570-7483961 Chlamydomonas reinhardtii
Cre03.g205600 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 7481962-7483961 Chlamydomonas reinhardtii
Cre03.g205600 5.0kb upstream 5.0kb upstream 8392 true chromosome_3: 7473570-7481961 Chlamydomonas reinhardtii
Cre03.g205600 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 7473570-7478569 Chlamydomonas reinhardtii
Cre03.g205600 5.0kb downstream 5.0kb downstream 8392 true chromosome_3: 7478570-7486961 Chlamydomonas reinhardtii
Cre03.g205600 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 7481962-7486961 Chlamydomonas reinhardtii
Cre03.g205600 10.0kb upstream 10.0kb upstream 13392 true chromosome_3: 7468570-7481961 Chlamydomonas reinhardtii
Cre03.g205600 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 7468570-7478569 Chlamydomonas reinhardtii
Cre03.g205600 10.0kb downstream 10.0kb downstream 13392 true chromosome_3: 7478570-7491961 Chlamydomonas reinhardtii
Cre03.g205600 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 7481962-7491961 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109441 5260 Chlorophyte View MSA
123426763 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.969        
cufflinks 8.098        
cufflinks 6.368        
cufflinks 7.35        
cufflinks 7.069        
cufflinks 8.467        
cufflinks 6.933        
cufflinks 7.147        
cufflinks 6.664        
cufflinks 3.855       Low
cufflinks 9.672       High
cufflinks 8.524        
cufflinks 5.468        
cufflinks 8.291        
cufflinks 7.094        
cufflinks 10.0       High
cufflinks 3.658       Low
cufflinks 5.608        
cufflinks 3.659       Low
cufflinks 10.697       High
cufflinks 6.419        
cufflinks 5.242        
cufflinks 10.945       High
cufflinks 8.665        
cufflinks 3.577       Low
cufflinks 21.6661 1.65977 41.6724   Low
cufflinks 14.1677 3.85913 24.4763    
cufflinks 4.12893 0.0 8.81004   Low
cufflinks 11.8653 1.55542 22.1752   Low
cufflinks 15.6162 3.02078 28.2116   High

0 Strain