Gene : AAD1 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g206600 Defline:  (1 of 1) 4.2.1.9 - Dihydroxy-acid dehydratase
Genomic Order:  1294 Name:  ? Cre03.g206600
Secondary Identifier:  ? PAC:30787719
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii BRANCHED-CHAIN-AA-SYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii ILEUSYN-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-3001 Chlamydomonas reinhardtii pathologic  
Creinhardtii VALSYN-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g206600 0.5kb upstream 0.5kb upstream 8166 true chromosome_3: 7332870-7341035 Chlamydomonas reinhardtii
Cre03.g206600 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 7332870-7333369 Chlamydomonas reinhardtii
Cre03.g206600 0.5kb downstream 0.5kb downstream 8166 true chromosome_3: 7333370-7341535 Chlamydomonas reinhardtii
Cre03.g206600 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 7341036-7341535 Chlamydomonas reinhardtii
Cre03.g206600 1.0kb upstream 1.0kb upstream 8666 true chromosome_3: 7332370-7341035 Chlamydomonas reinhardtii
Cre03.g206600 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 7332370-7333369 Chlamydomonas reinhardtii
Cre03.g206600 1.0kb downstream 1.0kb downstream 8666 true chromosome_3: 7333370-7342035 Chlamydomonas reinhardtii
Cre03.g206600 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 7341036-7342035 Chlamydomonas reinhardtii
Cre03.g206600 2.0kb upstream 2.0kb upstream 9666 true chromosome_3: 7331370-7341035 Chlamydomonas reinhardtii
Cre03.g206600 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 7331370-7333369 Chlamydomonas reinhardtii
Cre03.g206600 2.0kb downstream 2.0kb downstream 9666 true chromosome_3: 7333370-7343035 Chlamydomonas reinhardtii
Cre03.g206600 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 7341036-7343035 Chlamydomonas reinhardtii
Cre03.g206600 5.0kb upstream 5.0kb upstream 12666 true chromosome_3: 7328370-7341035 Chlamydomonas reinhardtii
Cre03.g206600 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 7328370-7333369 Chlamydomonas reinhardtii
Cre03.g206600 5.0kb downstream 5.0kb downstream 12666 true chromosome_3: 7333370-7346035 Chlamydomonas reinhardtii
Cre03.g206600 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 7341036-7346035 Chlamydomonas reinhardtii
Cre03.g206600 10.0kb upstream 10.0kb upstream 17666 true chromosome_3: 7323370-7341035 Chlamydomonas reinhardtii
Cre03.g206600 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 7323370-7333369 Chlamydomonas reinhardtii
Cre03.g206600 10.0kb downstream 10.0kb downstream 17666 true chromosome_3: 7333370-7351035 Chlamydomonas reinhardtii
Cre03.g206600 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 7341036-7351035 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110576 5260 Chlorophyte View MSA
123424997 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.21     High  
cufflinks 38.097     High  
cufflinks 42.848     High High
cufflinks 26.05     High  
cufflinks 40.085     High  
cufflinks 33.102     High  
cufflinks 22.505     High  
cufflinks 23.978     High  
cufflinks 43.679     High High
cufflinks 24.687     High  
cufflinks 33.654     High  
cufflinks 25.985     High  
cufflinks 27.065     High  
cufflinks 38.466     High  
cufflinks 22.067     High  
cufflinks 52.795     High High
cufflinks 10.805       Low
cufflinks 46.366     High High
cufflinks 12.324     High Low
cufflinks 24.16     High  
cufflinks 24.534     High  
cufflinks 16.355     High Low
cufflinks 28.238     High  
cufflinks 30.222     High  
cufflinks 11.38     High Low
cufflinks 218.07 2.73155 433.408 High High
cufflinks 159.447 21.6947 297.199 High  
cufflinks 10.6588 0.0 21.4365   Low
cufflinks 93.6825 0.0 191.986 High Low
cufflinks 117.964 1.08165 234.845 High High

0 Strain