Gene : Cre04.g211700 C. reinhardtii v5.6
Defline:  (1 of 55) PF00651 - BTB/POZ domain (BTB) Genomic Order:  236
Name:  ? Cre04.g211700 Secondary Identifier:  ? PAC:30791247
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g211700 0.5kb upstream 0.5kb upstream 3584 true chromosome_4: 1830256-1833839 Chlamydomonas reinhardtii
Cre04.g211700 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 1833340-1833839 Chlamydomonas reinhardtii
Cre04.g211700 0.5kb downstream 0.5kb downstream 3584 true chromosome_4: 1829756-1833339 Chlamydomonas reinhardtii
Cre04.g211700 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 1829756-1830255 Chlamydomonas reinhardtii
Cre04.g211700 1.0kb upstream 1.0kb upstream 4084 true chromosome_4: 1830256-1834339 Chlamydomonas reinhardtii
Cre04.g211700 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 1833340-1834339 Chlamydomonas reinhardtii
Cre04.g211700 1.0kb downstream 1.0kb downstream 4084 true chromosome_4: 1829256-1833339 Chlamydomonas reinhardtii
Cre04.g211700 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 1829256-1830255 Chlamydomonas reinhardtii
Cre04.g211700 2.0kb upstream 2.0kb upstream 5084 true chromosome_4: 1830256-1835339 Chlamydomonas reinhardtii
Cre04.g211700 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 1833340-1835339 Chlamydomonas reinhardtii
Cre04.g211700 2.0kb downstream 2.0kb downstream 5084 true chromosome_4: 1828256-1833339 Chlamydomonas reinhardtii
Cre04.g211700 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 1828256-1830255 Chlamydomonas reinhardtii
Cre04.g211700 5.0kb upstream 5.0kb upstream 8084 true chromosome_4: 1830256-1838339 Chlamydomonas reinhardtii
Cre04.g211700 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 1833340-1838339 Chlamydomonas reinhardtii
Cre04.g211700 5.0kb downstream 5.0kb downstream 8084 true chromosome_4: 1825256-1833339 Chlamydomonas reinhardtii
Cre04.g211700 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 1825256-1830255 Chlamydomonas reinhardtii
Cre04.g211700 10.0kb upstream 10.0kb upstream 13084 true chromosome_4: 1830256-1843339 Chlamydomonas reinhardtii
Cre04.g211700 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 1833340-1843339 Chlamydomonas reinhardtii
Cre04.g211700 10.0kb downstream 10.0kb downstream 13084 true chromosome_4: 1820256-1833339 Chlamydomonas reinhardtii
Cre04.g211700 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 1820256-1830255 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124094118 5260 Chlorophyte View MSA
123429159 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.13        
cufflinks 1.174        
cufflinks 0.735        
cufflinks 0.437        
cufflinks 0.832        
cufflinks 1.455        
cufflinks 1.219        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low Low
cufflinks 0.384        
cufflinks 0.616        
cufflinks 0.577        
cufflinks 0.454        
cufflinks 0.574        
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.635        
cufflinks 0.054     Low Low
cufflinks 0.017     Low Low
cufflinks 0.147     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.611       High
cufflinks 0.511        
cufflinks 0.013     Low Low
cufflinks 0.0876963 0.0 0.221733 Low Low
cufflinks 0.555816 0.0 1.35553    
cufflinks 1.76222 0.0 4.1304    
cufflinks 0.475122 0.0 1.01458    
cufflinks 1.23525 0.0 2.61403    

0 Strain