Gene : Cre03.g188950 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  1040
Name:  ? Cre03.g188950 Secondary Identifier:  ? PAC:30787506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g188950 0.5kb upstream 0.5kb upstream 4000 true chromosome_3: 5796974-5800973 Chlamydomonas reinhardtii
Cre03.g188950 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5796974-5797473 Chlamydomonas reinhardtii
Cre03.g188950 0.5kb downstream 0.5kb downstream 4000 true chromosome_3: 5797474-5801473 Chlamydomonas reinhardtii
Cre03.g188950 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5800974-5801473 Chlamydomonas reinhardtii
Cre03.g188950 1.0kb upstream 1.0kb upstream 4500 true chromosome_3: 5796474-5800973 Chlamydomonas reinhardtii
Cre03.g188950 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5796474-5797473 Chlamydomonas reinhardtii
Cre03.g188950 1.0kb downstream 1.0kb downstream 4500 true chromosome_3: 5797474-5801973 Chlamydomonas reinhardtii
Cre03.g188950 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5800974-5801973 Chlamydomonas reinhardtii
Cre03.g188950 2.0kb upstream 2.0kb upstream 5500 true chromosome_3: 5795474-5800973 Chlamydomonas reinhardtii
Cre03.g188950 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5795474-5797473 Chlamydomonas reinhardtii
Cre03.g188950 2.0kb downstream 2.0kb downstream 5500 true chromosome_3: 5797474-5802973 Chlamydomonas reinhardtii
Cre03.g188950 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5800974-5802973 Chlamydomonas reinhardtii
Cre03.g188950 5.0kb upstream 5.0kb upstream 8500 true chromosome_3: 5792474-5800973 Chlamydomonas reinhardtii
Cre03.g188950 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5792474-5797473 Chlamydomonas reinhardtii
Cre03.g188950 5.0kb downstream 5.0kb downstream 8500 true chromosome_3: 5797474-5805973 Chlamydomonas reinhardtii
Cre03.g188950 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5800974-5805973 Chlamydomonas reinhardtii
Cre03.g188950 10.0kb upstream 10.0kb upstream 13500 true chromosome_3: 5787474-5800973 Chlamydomonas reinhardtii
Cre03.g188950 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5787474-5797473 Chlamydomonas reinhardtii
Cre03.g188950 10.0kb downstream 10.0kb downstream 13500 true chromosome_3: 5797474-5810973 Chlamydomonas reinhardtii
Cre03.g188950 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5800974-5810973 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109482 5260 Chlorophyte View MSA
123425361 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.224        
cufflinks 2.441        
cufflinks 2.009        
cufflinks 2.169        
cufflinks 2.219        
cufflinks 2.465        
cufflinks 2.846        
cufflinks 3.44       High
cufflinks 2.183        
cufflinks 1.125       Low
cufflinks 1.714        
cufflinks 2.571        
cufflinks 2.49        
cufflinks 2.167        
cufflinks 1.659        
cufflinks 2.671        
cufflinks 1.248       Low
cufflinks 2.133        
cufflinks 0.877       Low
cufflinks 3.218       High
cufflinks 2.341        
cufflinks 1.259       Low
cufflinks 3.171       High
cufflinks 3.105       High
cufflinks 1.502        
cufflinks 4.09977 0.508069 7.69147   Low
cufflinks 5.087 0.493395 9.68061    
cufflinks 3.63992 0.0 8.07258    
cufflinks 4.11006 0.515001 7.70513    
cufflinks 6.40076 0.991816 11.8097    

0 Strain