Gene : Cre03.g188900 C. reinhardtii v5.6
Defline:  (1 of 2) PF06127 - Protein of unknown function (DUF962) (DUF962) Genomic Order:  1039
Name:  ? Cre03.g188900 Secondary Identifier:  ? PAC:30786920
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g188900 0.5kb upstream 0.5kb upstream 2351 true chromosome_3: 5795480-5797830 Chlamydomonas reinhardtii
Cre03.g188900 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 5797331-5797830 Chlamydomonas reinhardtii
Cre03.g188900 0.5kb downstream 0.5kb downstream 2351 true chromosome_3: 5794980-5797330 Chlamydomonas reinhardtii
Cre03.g188900 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 5794980-5795479 Chlamydomonas reinhardtii
Cre03.g188900 1.0kb upstream 1.0kb upstream 2851 true chromosome_3: 5795480-5798330 Chlamydomonas reinhardtii
Cre03.g188900 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 5797331-5798330 Chlamydomonas reinhardtii
Cre03.g188900 1.0kb downstream 1.0kb downstream 2851 true chromosome_3: 5794480-5797330 Chlamydomonas reinhardtii
Cre03.g188900 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 5794480-5795479 Chlamydomonas reinhardtii
Cre03.g188900 2.0kb upstream 2.0kb upstream 3851 true chromosome_3: 5795480-5799330 Chlamydomonas reinhardtii
Cre03.g188900 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 5797331-5799330 Chlamydomonas reinhardtii
Cre03.g188900 2.0kb downstream 2.0kb downstream 3851 true chromosome_3: 5793480-5797330 Chlamydomonas reinhardtii
Cre03.g188900 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 5793480-5795479 Chlamydomonas reinhardtii
Cre03.g188900 5.0kb upstream 5.0kb upstream 6851 true chromosome_3: 5795480-5802330 Chlamydomonas reinhardtii
Cre03.g188900 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 5797331-5802330 Chlamydomonas reinhardtii
Cre03.g188900 5.0kb downstream 5.0kb downstream 6851 true chromosome_3: 5790480-5797330 Chlamydomonas reinhardtii
Cre03.g188900 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 5790480-5795479 Chlamydomonas reinhardtii
Cre03.g188900 10.0kb upstream 10.0kb upstream 11851 true chromosome_3: 5795480-5807330 Chlamydomonas reinhardtii
Cre03.g188900 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 5797331-5807330 Chlamydomonas reinhardtii
Cre03.g188900 10.0kb downstream 10.0kb downstream 11851 true chromosome_3: 5785480-5797330 Chlamydomonas reinhardtii
Cre03.g188900 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 5785480-5795479 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124098120 5260 Chlorophyte View MSA
123424531 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.42       Low
cufflinks 2.067        
cufflinks 3.236       High
cufflinks 1.357        
cufflinks 2.108        
cufflinks 2.054        
cufflinks 4.206       High
cufflinks 1.858        
cufflinks 0.487       Low
cufflinks 1.606        
cufflinks 1.624        
cufflinks 1.825        
cufflinks 4.113       High
cufflinks 1.83        
cufflinks 1.364        
cufflinks 0.522       Low
cufflinks 0.42       Low
cufflinks 1.802        
cufflinks 1.983        
cufflinks 2.054        
cufflinks 1.399        
cufflinks 0.238       Low
cufflinks 3.596       High
cufflinks 2.291        
cufflinks 0.32       Low
cufflinks 0.577161 0.0 1.26017   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.02768 0.0 4.94742    
cufflinks 1.47873 0.0 3.02131    
cufflinks 1.97532 0.0 4.193    

0 Strain