Gene : GCST C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g193750 Defline:  (1 of 1) K00605 - aminomethyltransferase (gcvT, AMT)
Genomic Order:  1135 Name:  ? Cre03.g193750
Secondary Identifier:  ? PAC:30787415
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLYCLEAV-PWY Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g193750 0.5kb upstream 0.5kb upstream 4542 true chromosome_3: 6347305-6351846 Chlamydomonas reinhardtii
Cre03.g193750 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 6347305-6347804 Chlamydomonas reinhardtii
Cre03.g193750 0.5kb downstream 0.5kb downstream 4542 true chromosome_3: 6347805-6352346 Chlamydomonas reinhardtii
Cre03.g193750 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 6351847-6352346 Chlamydomonas reinhardtii
Cre03.g193750 1.0kb upstream 1.0kb upstream 5042 true chromosome_3: 6346805-6351846 Chlamydomonas reinhardtii
Cre03.g193750 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 6346805-6347804 Chlamydomonas reinhardtii
Cre03.g193750 1.0kb downstream 1.0kb downstream 5042 true chromosome_3: 6347805-6352846 Chlamydomonas reinhardtii
Cre03.g193750 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 6351847-6352846 Chlamydomonas reinhardtii
Cre03.g193750 2.0kb upstream 2.0kb upstream 6042 true chromosome_3: 6345805-6351846 Chlamydomonas reinhardtii
Cre03.g193750 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 6345805-6347804 Chlamydomonas reinhardtii
Cre03.g193750 2.0kb downstream 2.0kb downstream 6042 true chromosome_3: 6347805-6353846 Chlamydomonas reinhardtii
Cre03.g193750 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 6351847-6353846 Chlamydomonas reinhardtii
Cre03.g193750 5.0kb upstream 5.0kb upstream 9042 true chromosome_3: 6342805-6351846 Chlamydomonas reinhardtii
Cre03.g193750 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 6342805-6347804 Chlamydomonas reinhardtii
Cre03.g193750 5.0kb downstream 5.0kb downstream 9042 true chromosome_3: 6347805-6356846 Chlamydomonas reinhardtii
Cre03.g193750 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 6351847-6356846 Chlamydomonas reinhardtii
Cre03.g193750 10.0kb upstream 10.0kb upstream 14042 true chromosome_3: 6337805-6351846 Chlamydomonas reinhardtii
Cre03.g193750 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 6337805-6347804 Chlamydomonas reinhardtii
Cre03.g193750 10.0kb downstream 10.0kb downstream 14042 true chromosome_3: 6347805-6361846 Chlamydomonas reinhardtii
Cre03.g193750 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 6351847-6361846 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110913 5260 Chlorophyte View MSA
123424844 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.022     High  
cufflinks 38.879     High  
cufflinks 45.858     High  
cufflinks 48.742     High  
cufflinks 38.537     High  
cufflinks 46.222     High  
cufflinks 21.742     High Low
cufflinks 50.47     High  
cufflinks 32.024     High  
cufflinks 19.32     High Low
cufflinks 38.768     High  
cufflinks 52.39     High  
cufflinks 44.396     High  
cufflinks 40.825     High  
cufflinks 42.585     High  
cufflinks 43.964     High  
cufflinks 49.843     High  
cufflinks 45.607     High  
cufflinks 7.204     High Low
cufflinks 30.541     High  
cufflinks 40.426     High  
cufflinks 39.016     High  
cufflinks 42.425     High  
cufflinks 49.595     High  
cufflinks 48.967     High  
cufflinks 33.4415 0.887769 65.9951 High  
cufflinks 44.8201 10.9676 78.6727 High  
cufflinks 70.7319 0.0 146.331 High  
cufflinks 33.0926 0.885275 65.2999 High  
cufflinks 73.8965 6.14014 141.653 High  

0 Strain