Gene : MDN1 C. reinhardtii v5.6
Primary Identifier:  ? Cre03.g194850 Defline:  (1 of 1) PTHR11540//PTHR11540:SF14 - MALATE AND LACTATE DEHYDROGENASE // MALATE DEHYDROGENASE, CHLOROPLASTIC
Genomic Order:  1160 Name:  ? Cre03.g194850
Secondary Identifier:  ? PAC:30788115
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Creinhardtii GLUCONEO-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii GLYOXYLATE-BYPASS Chlamydomonas reinhardtii pathologic  
Creinhardtii P23-PWY Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5464 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-561 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-5690 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY66-399 Chlamydomonas reinhardtii pathologic  
Creinhardtii PWY-7115 Chlamydomonas reinhardtii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g194850 0.5kb upstream 0.5kb upstream 3917 true chromosome_3: 6462842-6466758 Chlamydomonas reinhardtii
Cre03.g194850 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 6462842-6463341 Chlamydomonas reinhardtii
Cre03.g194850 0.5kb downstream 0.5kb downstream 3917 true chromosome_3: 6463342-6467258 Chlamydomonas reinhardtii
Cre03.g194850 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 6466759-6467258 Chlamydomonas reinhardtii
Cre03.g194850 1.0kb upstream 1.0kb upstream 4417 true chromosome_3: 6462342-6466758 Chlamydomonas reinhardtii
Cre03.g194850 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 6462342-6463341 Chlamydomonas reinhardtii
Cre03.g194850 1.0kb downstream 1.0kb downstream 4417 true chromosome_3: 6463342-6467758 Chlamydomonas reinhardtii
Cre03.g194850 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 6466759-6467758 Chlamydomonas reinhardtii
Cre03.g194850 2.0kb upstream 2.0kb upstream 5417 true chromosome_3: 6461342-6466758 Chlamydomonas reinhardtii
Cre03.g194850 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 6461342-6463341 Chlamydomonas reinhardtii
Cre03.g194850 2.0kb downstream 2.0kb downstream 5417 true chromosome_3: 6463342-6468758 Chlamydomonas reinhardtii
Cre03.g194850 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 6466759-6468758 Chlamydomonas reinhardtii
Cre03.g194850 5.0kb upstream 5.0kb upstream 8417 true chromosome_3: 6458342-6466758 Chlamydomonas reinhardtii
Cre03.g194850 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 6458342-6463341 Chlamydomonas reinhardtii
Cre03.g194850 5.0kb downstream 5.0kb downstream 8417 true chromosome_3: 6463342-6471758 Chlamydomonas reinhardtii
Cre03.g194850 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 6466759-6471758 Chlamydomonas reinhardtii
Cre03.g194850 10.0kb upstream 10.0kb upstream 13417 true chromosome_3: 6453342-6466758 Chlamydomonas reinhardtii
Cre03.g194850 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 6453342-6463341 Chlamydomonas reinhardtii
Cre03.g194850 10.0kb downstream 10.0kb downstream 13417 true chromosome_3: 6463342-6476758 Chlamydomonas reinhardtii
Cre03.g194850 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 6466759-6476758 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111621 5260 Chlorophyte View MSA
123426123 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 93.003     High  
cufflinks 127.713     High  
cufflinks 295.619     High High
cufflinks 209.933     High  
cufflinks 293.162     High High
cufflinks 226.579     High  
cufflinks 275.324     High High
cufflinks 71.75     High  
cufflinks 182.491     High  
cufflinks 174.343     High  
cufflinks 90.446     High  
cufflinks 65.497     High  
cufflinks 104.117     High  
cufflinks 288.436     High High
cufflinks 59.109     High  
cufflinks 182.511     High  
cufflinks 13.064     High Low
cufflinks 199.25     High  
cufflinks 34.717     High  
cufflinks 52.012     High  
cufflinks 68.8     High  
cufflinks 5.033       Low
cufflinks 75.063     High  
cufflinks 63.291     High  
cufflinks 5.696       Low
cufflinks 890.052 113.008 1667.1 High  
cufflinks 231.655 35.5311 427.78 High  
cufflinks 313.867 0.0 663.736 High  
cufflinks 639.476 49.8334 1229.12 High Low
cufflinks 648.719 11.1857 1286.25 High High

0 Strain