Gene : Cre03.g197450 C. reinhardtii v5.6
Defline:  (1 of 1) PTHR10799:SF676 - WINGED HELIX DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  1214
Name:  ? Cre03.g197450 Secondary Identifier:  ? PAC:30787635
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre03.g197450 0.5kb upstream 0.5kb upstream 13022 true chromosome_3: 6682049-6695070 Chlamydomonas reinhardtii
Cre03.g197450 0.5kb upstream 0.5kb upstream 500 false chromosome_3: 6682049-6682548 Chlamydomonas reinhardtii
Cre03.g197450 0.5kb downstream 0.5kb downstream 13022 true chromosome_3: 6682549-6695570 Chlamydomonas reinhardtii
Cre03.g197450 0.5kb downstream 0.5kb downstream 500 false chromosome_3: 6695071-6695570 Chlamydomonas reinhardtii
Cre03.g197450 1.0kb upstream 1.0kb upstream 13522 true chromosome_3: 6681549-6695070 Chlamydomonas reinhardtii
Cre03.g197450 1.0kb upstream 1.0kb upstream 1000 false chromosome_3: 6681549-6682548 Chlamydomonas reinhardtii
Cre03.g197450 1.0kb downstream 1.0kb downstream 13522 true chromosome_3: 6682549-6696070 Chlamydomonas reinhardtii
Cre03.g197450 1.0kb downstream 1.0kb downstream 1000 false chromosome_3: 6695071-6696070 Chlamydomonas reinhardtii
Cre03.g197450 2.0kb upstream 2.0kb upstream 14522 true chromosome_3: 6680549-6695070 Chlamydomonas reinhardtii
Cre03.g197450 2.0kb upstream 2.0kb upstream 2000 false chromosome_3: 6680549-6682548 Chlamydomonas reinhardtii
Cre03.g197450 2.0kb downstream 2.0kb downstream 14522 true chromosome_3: 6682549-6697070 Chlamydomonas reinhardtii
Cre03.g197450 2.0kb downstream 2.0kb downstream 2000 false chromosome_3: 6695071-6697070 Chlamydomonas reinhardtii
Cre03.g197450 5.0kb upstream 5.0kb upstream 17522 true chromosome_3: 6677549-6695070 Chlamydomonas reinhardtii
Cre03.g197450 5.0kb upstream 5.0kb upstream 5000 false chromosome_3: 6677549-6682548 Chlamydomonas reinhardtii
Cre03.g197450 5.0kb downstream 5.0kb downstream 17522 true chromosome_3: 6682549-6700070 Chlamydomonas reinhardtii
Cre03.g197450 5.0kb downstream 5.0kb downstream 5000 false chromosome_3: 6695071-6700070 Chlamydomonas reinhardtii
Cre03.g197450 10.0kb upstream 10.0kb upstream 22522 true chromosome_3: 6672549-6695070 Chlamydomonas reinhardtii
Cre03.g197450 10.0kb upstream 10.0kb upstream 10000 false chromosome_3: 6672549-6682548 Chlamydomonas reinhardtii
Cre03.g197450 10.0kb downstream 10.0kb downstream 22522 true chromosome_3: 6682549-6705070 Chlamydomonas reinhardtii
Cre03.g197450 10.0kb downstream 10.0kb downstream 10000 false chromosome_3: 6695071-6705070 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080065 5260 Chlorophyte Singleton cluster - no MSA
123397878 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.458       Low
cufflinks 1.405        
cufflinks 1.083        
cufflinks 1.552        
cufflinks 0.981        
cufflinks 0.915        
cufflinks 1.418        
cufflinks 1.81       High
cufflinks 0.652       Low
cufflinks 0.456       Low
cufflinks 1.54        
cufflinks 1.862       High
cufflinks 0.744       Low
cufflinks 1.013        
cufflinks 1.326        
cufflinks 0.873        
cufflinks 1.485        
cufflinks 1.037        
cufflinks 0.641       Low
cufflinks 2.675       High
cufflinks 1.644        
cufflinks 1.241        
cufflinks 1.437        
cufflinks 1.722        
cufflinks 1.615        
cufflinks 1.94125 0.298359 3.58413    
cufflinks 1.78751 0.420926 3.15409    
cufflinks 1.28683 0.0 2.67773    
cufflinks 3.794 0.351782 7.23621   High
cufflinks 3.01836 0.594946 5.44178    

0 Strain