Gene : Cre04.g224200 C. reinhardtii v5.6
Defline:  (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED Genomic Order:  381
Name:  ? Cre04.g224200 Secondary Identifier:  ? PAC:30791197
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre04.g224200 0.5kb upstream 0.5kb upstream 13711 true chromosome_4: 2826125-2839835 Chlamydomonas reinhardtii
Cre04.g224200 0.5kb upstream 0.5kb upstream 500 false chromosome_4: 2839336-2839835 Chlamydomonas reinhardtii
Cre04.g224200 0.5kb downstream 0.5kb downstream 13711 true chromosome_4: 2825625-2839335 Chlamydomonas reinhardtii
Cre04.g224200 0.5kb downstream 0.5kb downstream 500 false chromosome_4: 2825625-2826124 Chlamydomonas reinhardtii
Cre04.g224200 1.0kb upstream 1.0kb upstream 14211 true chromosome_4: 2826125-2840335 Chlamydomonas reinhardtii
Cre04.g224200 1.0kb upstream 1.0kb upstream 1000 false chromosome_4: 2839336-2840335 Chlamydomonas reinhardtii
Cre04.g224200 1.0kb downstream 1.0kb downstream 14211 true chromosome_4: 2825125-2839335 Chlamydomonas reinhardtii
Cre04.g224200 1.0kb downstream 1.0kb downstream 1000 false chromosome_4: 2825125-2826124 Chlamydomonas reinhardtii
Cre04.g224200 2.0kb upstream 2.0kb upstream 15211 true chromosome_4: 2826125-2841335 Chlamydomonas reinhardtii
Cre04.g224200 2.0kb upstream 2.0kb upstream 2000 false chromosome_4: 2839336-2841335 Chlamydomonas reinhardtii
Cre04.g224200 2.0kb downstream 2.0kb downstream 15211 true chromosome_4: 2824125-2839335 Chlamydomonas reinhardtii
Cre04.g224200 2.0kb downstream 2.0kb downstream 2000 false chromosome_4: 2824125-2826124 Chlamydomonas reinhardtii
Cre04.g224200 5.0kb upstream 5.0kb upstream 18211 true chromosome_4: 2826125-2844335 Chlamydomonas reinhardtii
Cre04.g224200 5.0kb upstream 5.0kb upstream 5000 false chromosome_4: 2839336-2844335 Chlamydomonas reinhardtii
Cre04.g224200 5.0kb downstream 5.0kb downstream 18211 true chromosome_4: 2821125-2839335 Chlamydomonas reinhardtii
Cre04.g224200 5.0kb downstream 5.0kb downstream 5000 false chromosome_4: 2821125-2826124 Chlamydomonas reinhardtii
Cre04.g224200 10.0kb upstream 10.0kb upstream 23211 true chromosome_4: 2826125-2849335 Chlamydomonas reinhardtii
Cre04.g224200 10.0kb upstream 10.0kb upstream 10000 false chromosome_4: 2839336-2849335 Chlamydomonas reinhardtii
Cre04.g224200 10.0kb downstream 10.0kb downstream 23211 true chromosome_4: 2816125-2839335 Chlamydomonas reinhardtii
Cre04.g224200 10.0kb downstream 10.0kb downstream 10000 false chromosome_4: 2816125-2826124 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124080853 5260 Chlorophyte Singleton cluster - no MSA
123398610 5275 Viridiplantae Singleton cluster - no MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.051       Low
cufflinks 2.163        
cufflinks 3.656        
cufflinks 6.107       High
cufflinks 1.994        
cufflinks 3.069        
cufflinks 1.942        
cufflinks 7.571       High
cufflinks 1.449        
cufflinks 0.397       Low
cufflinks 8.808       High
cufflinks 4.878        
cufflinks 2.405        
cufflinks 1.756        
cufflinks 5.885       High
cufflinks 1.148       Low
cufflinks 1.992        
cufflinks 3.884        
cufflinks 1.53        
cufflinks 1.725        
cufflinks 4.962        
cufflinks 3.194        
cufflinks 2.059        
cufflinks 9.874       High
cufflinks 3.829        
cufflinks 4.33659 0.666511 8.00667   Low
cufflinks 18.8735 4.8379 32.9091    
cufflinks 35.4095 0.0 73.2379 High High
cufflinks 9.18346 0.780246 17.5867   High
cufflinks 12.4867 2.03537 22.9381   Low

0 Strain